RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 TBC1D17Q9HA65 648 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 PELI2Q9HAT8 420 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 SLC35C2Q9NQQ7 365 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 MRPL39Q9NYK5 338 aaKnown RBP10.53□□□□□ -0.72
RCC1-204ENST00000398958 TESQ9UGI8 421 aaKnown RBP10.53□□□□□ -0.72
RCC1-204ENST00000398958 GPR55Q9Y2T6 319 aaPredicted RBP10.53□□□□□ -0.72
RCC1-204ENST00000398958 CACNA1HO95180 2353 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 A0A0A6YYD5 115 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 ATP6V1G2-DDX39BF2Z307 99 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 H1F0P07305 194 aaKnown RBP10.53□□□□□ -0.72
RCC1-204ENST00000398958 THEGLP0DJG4 465 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 SSTR2P30874 369 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 GABRA5P31644 462 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 TALDO1P37837 337 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 RPL3P39023 403 aaKnown RBP10.53□□□□□ -0.72
RCC1-204ENST00000398958 ATP12AP54707 1039 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 SRP54P61011 504 aaKnown RBP10.53□□□□□ -0.72
RCC1-204ENST00000398958 SIM1P81133 766 aaPredicted RBP10.53□□□□□ -0.72
RCC1-204ENST00000398958 FUT5Q11128 374 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 GINS1Q14691 196 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 SLC9A5Q14940 896 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 SUZ12Q15022 739 aaKnown RBP10.53□□□□□ -0.72
RCC1-204ENST00000398958 DEFB133Q30KQ1 61 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 PGBD2Q6P3X8 592 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 B3GLCTQ6Y288 498 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 TRILQ7L0X0 811 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 PARGQ86W56 976 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 VRK2Q86Y07 508 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 PRSS58Q8IYP2 241 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 FAM26EQ8N5C1 309 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 OR6T1Q8NGN1 323 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 NECAB3Q96P71 396 aaPredicted RBP10.53□□□□□ -0.72
RCC1-204ENST00000398958 OR2M4Q96R27 311 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 HEXA-AS1Q9H8Q6 139 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 OBP2AQ9NY56 170 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 EXTL2Q9UBQ6 330 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 ADAM30Q9UKF2 790 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 ACSL5Q9ULC5 683 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 GPR52Q9Y2T5 361 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 MRPS2Q9Y399 296 aaKnown RBP10.53□□□□□ -0.72
RCC1-204ENST00000398958 PCDH15Q96QU1 1955 aa10.53□□□□□ -0.72
RCC1-204ENST00000398958 AHCTF1Q8WYP5 2266 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 FANCMQ8IYD8 2048 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 FAAHO00519 579 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 HYAL3O43820 417 aaPredicted RBP10.52□□□□□ -0.72
RCC1-204ENST00000398958 EPPINO95925 133 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 DHFRP00374 187 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 HK1P19367 917 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 SLC6A1P30531 599 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 SOX18P35713 384 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 CD79BP40259 229 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 TNFRSF4P43489 277 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 EXOSC2Q13868 293 aaKnown RBP10.52□□□□□ -0.72
RCC1-204ENST00000398958 INSL4Q14641 139 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 GRK1Q15835 563 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 COL28A1Q2UY09 1125 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 C3orf38Q5JPI3 329 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 CLEC12AQ5QGZ9 265 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 ACSM5Q6NUN0 579 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 IKBIPQ70UQ0 350 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 LUZP2Q86TE4 346 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 IQCHQ86VS3 1027 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 SUN3Q8TAQ9 357 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 OTULINQ96BN8 352 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 RNFT2Q96EX2 444 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 CLEC4MQ9H2X3 399 aaPredicted RBP10.52□□□□□ -0.72
RCC1-204ENST00000398958 SYNDIG1Q9H7V2 258 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 NT5DC2Q9H857 520 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 PRDM7Q9NQW5 492 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 CLCA2Q9UQC9 943 aa10.52□□□□□ -0.72
RCC1-204ENST00000398958 MED12Q93074 2177 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 C2orf92A0A1B0GVN3 265 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 SHISA3A0PJX4 238 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 CPSF4LA6NMK7 179 aaKnown RBP10.52□□□□□ -0.73
RCC1-204ENST00000398958 MAN2B1O00754 1011 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 LANCL1O43813 399 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 FCMRO60667 390 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 SERPINI2O75830 405 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 CH25HO95992 272 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 ZNF888P0CJ79 500 aaPredicted RBP10.52□□□□□ -0.73
RCC1-204ENST00000398958 ANXA3P12429 323 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 HIST1H1TP22492 207 aaPredicted RBP10.52□□□□□ -0.73
RCC1-204ENST00000398958 ATP5A1P25705 553 aaKnown RBP10.52□□□□□ -0.73
RCC1-204ENST00000398958 PTBP1P26599 531 aaKnown RBP eCLIP10.52□□□□□ -0.73
RCC1-204ENST00000398958 FGF9P31371 208 aaPredicted RBP10.52□□□□□ -0.73
RCC1-204ENST00000398958 ZNF81P51508 661 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 DMWDQ09019 674 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 CCINQ13939 588 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 AMZ1Q400G9 498 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 GPR139Q6DWJ6 353 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 KIAA1161Q6NSJ0 714 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 LSM14AQ8ND56 463 aaKnown RBP10.52□□□□□ -0.73
RCC1-204ENST00000398958 TSTD1Q8NFU3 115 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 LHFPL5Q8TAF8 219 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 NEIL3Q8TAT5 605 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 RSC1A1Q92681 617 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 DNAJA3Q96EY1 480 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 SORCS2Q96PQ0 1159 aa10.52□□□□□ -0.73
RCC1-204ENST00000398958 POLDIP3Q9BY77 421 aaKnown RBP10.52□□□□□ -0.73
RCC1-204ENST00000398958 ABCG5Q9H222 651 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms