RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SYNPOQ8N3V7 929 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR51Q1Q8NH59 317 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 BABAM2Q9NXR7 383 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 COPZ2Q9P299 210 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC6A5Q9Y345 797 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 PLEKHM1Q9Y4G2 1056 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 AGAP5A6NIR3 686 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 FXYD1O00168 92 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 ANXA3P12429 323 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 UGT2B10P36537 528 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 MLF2Q15773 248 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 GPR139Q6DWJ6 353 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 SHISA6Q6ZSJ9 500 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 NUDT8Q8WV74 236 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZFPM2Q8WW38 1151 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 HLA-CQ95604 372 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 DUS3LQ96G46 650 aaKnown RBP13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 SEMA6CQ9H3T2 930 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 PSORS1C1Q9UIG5 152 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 TRAV27A0A087WT01 109 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 RAB11BQ15907 218 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 TMEM64Q6YI46 380 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR13C3Q8NGS6 347 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 GPR148Q8TDV2 347 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 FOLH1BQ9HBA9 442 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 VNN3Q9NY84 501 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 TAS2R8Q9NYW2 309 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC7A11Q9UPY5 501 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 ASB4Q9Y574 426 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 KIAA1217Q5T5P2 1943 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 H2AFB2P0C5Z0 115 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 CSNK1EP49674 416 aaKnown RBP13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 HSD11B2P80365 405 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 GLO1Q04760 184 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 LILRA6Q6PI73 481 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF683Q8IZ20 524 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 GPR137CQ8N3F9 429 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR13F1Q8NGS4 319 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 TRMT10AQ8TBZ6 339 aaKnown RBP13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 TMEM165Q9HC07 324 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 INIPQ9NRY2 104 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 ATXN7L1Q9ULK2 861 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 COL4A5P29400 1685 aa13.29□□□□□ -0.28
PCDHGA11-201ENST00000398587 TEX13CA0A0J9YWL9 993 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 GJE1A6NN92 205 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 A8MV72 311 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 H3BML4 177 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 UPK1BO75841 260 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC35E2P0CK97 266 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 HTR3AP46098 478 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 ADARB1P78563 741 aaKnown RBP13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 EEF1A1P5Q5VTE0 462 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 PMM1Q92871 262 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 TP63Q9H3D4 680 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 EGLN3Q9H6Z9 239 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 PLAC1Q9HBJ0 212 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 NLKQ9UBE8 527 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 VDAC3Q9Y277 283 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 SEC14L5O43304 696 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 PRKRAO75569 313 aaKnown RBP13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 GRK5P34947 590 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 DAP3P51398 398 aaKnown RBP13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 GPR19Q15760 415 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 CDKN3Q16667 212 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 MFSD12Q6NUT3 480 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 NAXEQ8NCW5 288 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 CCDC54Q8NEL0 328 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 MRI1Q9BV20 369 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 NAA50Q9GZZ1 169 aaKnown RBP13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 MEPEQ9NQ76 525 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 RP1L1Q8IWN7 2480 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 ARID1BQ8NFD5 2236 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 OLFM2O95897 454 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 CAPNS1P04632 268 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 PRKXP51817 358 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 GARNL3Q5VVW2 1013 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 MMP17Q9ULZ9 603 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 PRH1P02810 166 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 ELAVL4P26378 380 aaKnown RBP13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 ACSM3Q53FZ2 586 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 BCL2L15Q5TBC7 163 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC22A10Q63ZE4 541 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 KDM4DQ6B0I6 523 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 CNIH2Q6PI25 160 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 PPP1R3BQ86XI6 285 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 IQCF2Q8IXL9 164 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF565Q8N9K5 539 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF417Q8TAU3 575 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC37A2Q8TED4 501 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 CASTOR1Q8WTX7 329 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 HOXB13Q92826 284 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 MS4A6EQ96DS6 147 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 INTS14Q96SY0 518 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 PBX4Q9BYU1 374 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC25A37Q9NYZ2 338 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 NCDNQ9UBB6 729 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 TBC1D29Q9UFV1 150 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 CARD8Q9Y2G2 431 aa13.28□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF264O43296 627 aa13.27□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZFAND5O76080 213 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms