RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 OR5M1Q8NGP8 315 aa14.03□□□□□ -0.16
CYLD-202ENST00000398568 SMAP2Q8WU79 429 aaPredicted RBP14.03□□□□□ -0.16
CYLD-202ENST00000398568 THEM6Q8WUY1 208 aa14.03□□□□□ -0.16
CYLD-202ENST00000398568 ZC3H10Q96K80 434 aaKnown RBP14.03□□□□□ -0.16
CYLD-202ENST00000398568 TMEM138Q9NPI0 162 aa14.03□□□□□ -0.16
CYLD-202ENST00000398568 CTPS2Q9NRF8 586 aa14.03□□□□□ -0.16
CYLD-202ENST00000398568 ZNF629Q9UEG4 869 aaPredicted RBP14.03□□□□□ -0.16
CYLD-202ENST00000398568 KANTRA0A1W2PQU2 76 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 E7EQ34 232 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 GOSR2O14653 212 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 PRAMEF4O60810 478 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 GPR37L1O60883 481 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 AKR7A3O95154 331 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 ACHEP22303 614 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 FPR3P25089 353 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 SLC11A2P49281 568 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 ART1P52961 327 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 TIGD5Q53EQ6 642 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 UBXN11Q5T124 520 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 PRAMEF9Q5VWM5 478 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 TNFAIP8L2Q6P589 184 aaPredicted RBP14.02□□□□□ -0.16
CYLD-202ENST00000398568 NAA40Q86UY6 237 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 LRRTM3Q86VH5 581 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 ZDHHC12Q96GR4 267 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 SMG9Q9H0W8 520 aaKnown RBP14.02□□□□□ -0.16
CYLD-202ENST00000398568 CACYBPQ9HB71 228 aaKnown RBP14.02□□□□□ -0.16
CYLD-202ENST00000398568 PADI3Q9ULW8 664 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 NPFFR2Q9Y5X5 522 aa14.02□□□□□ -0.16
CYLD-202ENST00000398568 UBXN7O94888 489 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 TIA1P31483 386 aaKnown RBP eCLIP14.02□□□□□ -0.17
CYLD-202ENST00000398568 EFNB1P98172 346 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 SORDQ00796 357 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 DEFA6Q01524 100 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 TMEM255AQ5JRV8 349 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 THEM5Q8N1Q8 247 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 GPR32P1Q8NGA4 272 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 TNFAIP8L1Q8WVP5 186 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 ZNF354BQ96LW1 612 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 PLA2G12AQ9BZM1 189 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 MAGEH1Q9H213 219 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 ISG20L2Q9H9L3 353 aaKnown RBP14.02□□□□□ -0.17
CYLD-202ENST00000398568 PCDHB9Q9Y5E1 797 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 TRAPPC13A5PLN9 417 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 CTDSPLO15194 276 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 KRT33AO76009 404 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 IGHV2-70P01814 119 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 SERPIND1P05546 499 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 ACP5P13686 325 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 BDH1Q02338 343 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 EIF2S3LQ2VIR3 472 aaKnown RBP14.02□□□□□ -0.17
CYLD-202ENST00000398568 LYPLAL1Q5VWZ2 237 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 HEPHL1Q6MZM0 1159 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 MOB3CQ70IA8 216 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 MEX3DQ86XN8 651 aaKnown RBP14.02□□□□□ -0.17
CYLD-202ENST00000398568 DMBX1Q8NFW5 382 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 ECHDC3Q96DC8 303 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 ZNF607Q96SK3 696 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 OR51I1Q9H343 314 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 STOX2Q9P2F5 926 aaPredicted RBP14.02□□□□□ -0.17
CYLD-202ENST00000398568 PLEKHA6Q9Y2H5 1048 aa14.02□□□□□ -0.17
CYLD-202ENST00000398568 C8GP07360 202 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 FBP1P09467 338 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 RPA2P15927 270 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 MPGP29372 298 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 RAE1P78406 368 aaKnown RBP14.01□□□□□ -0.17
CYLD-202ENST00000398568 RBMS2Q15434 407 aaKnown RBP14.01□□□□□ -0.17
CYLD-202ENST00000398568 TRAM1Q15629 374 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 RAB12Q6IQ22 244 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 MRPL10Q7Z7H8 261 aaKnown RBP14.01□□□□□ -0.17
CYLD-202ENST00000398568 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.01□□□□□ -0.17
CYLD-202ENST00000398568 ZSCAN1Q8NBB4 408 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 OR51G2Q8NGK0 314 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 SETD7Q8WTS6 366 aaKnown RBP14.01□□□□□ -0.17
CYLD-202ENST00000398568 NR4A3Q92570 626 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 EXOSC8Q96B26 276 aaKnown RBP14.01□□□□□ -0.17
CYLD-202ENST00000398568 PEX11GQ96HA9 241 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 TBX5Q99593 518 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 TMEM185BQ9H7F4 350 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 ASF1BQ9NVP2 202 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 KLHL9Q9P2J3 617 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 GHRLQ9UBU3 117 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 MYO7AQ13402 2215 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 F5H5T6 163 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 FMO6PO60774 539 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 RLN1P04808 185 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 TYMPP19971 482 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 HSD3B2P26439 372 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 HOXD9P28356 352 aaPredicted RBP14.01□□□□□ -0.17
CYLD-202ENST00000398568 IFNGR2P38484 337 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 OPRD1P41143 372 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 SLC6A12P48065 614 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 SGCAQ16586 387 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 ADGRG2Q8IZP9 1017 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 ACBD7Q8N6N7 88 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 OR52B4Q8NGK2 314 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 OR5W2Q8NH69 310 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 FGF11Q92914 225 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 TMEM19Q96HH6 336 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 ENTPD4Q9Y227 616 aa14.01□□□□□ -0.17
CYLD-202ENST00000398568 LRIT2A6NDA9 550 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms