RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 CCDC116Q8IYX3 515 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 MIER2Q8N344 545 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 ZNF675Q8TD23 568 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 COQ8BQ96D53 544 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 PLPPR2Q96GM1 343 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 TEX37Q96LM6 180 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 BBS4Q96RK4 519 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 PRPF18Q99633 342 aaKnown RBP12.85□□□□□ -0.35
RAB1A-201ENST00000398529 TACO1Q9BSH4 297 aaKnown RBP12.85□□□□□ -0.35
RAB1A-201ENST00000398529 NGBQ9NPG2 151 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 YAE1D1Q9NRH1 226 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 ZIM2Q9NZV7 527 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 MRTO4Q9UKD2 239 aaKnown RBP12.85□□□□□ -0.35
RAB1A-201ENST00000398529 LAMP3Q9UQV4 416 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 ZNF337Q9Y3M9 751 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 SNX8Q9Y5X2 465 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 AP4B1Q9Y6B7 739 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 MYO1GB0I1T2 1018 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 PDPK1O15530 556 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 KLF4O43474 513 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 CT45A8P0DMV1 189 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 CT45A9P0DMV2 189 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 LAMP1P11279 417 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 IL12AP29459 219 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 NTSP30990 170 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 EVI2BP34910 448 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 CLDN15P56746 228 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 CORO7P57737 925 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 DPY19L1Q2PZI1 675 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 PGS1Q32NB8 556 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 GLYR1Q49A26 553 aaPredicted RBP12.84□□□□□ -0.35
RAB1A-201ENST00000398529 CT45A2Q5DJT8 189 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 ALKBH2Q6NS38 261 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 BEND4Q6ZU67 534 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 PIGWQ7Z7B1 504 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 OR6K3Q8NGY3 331 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 AKAP1Q92667 903 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■□□□ 13
RAB1A-201ENST00000398529 CIDECQ96AQ7 238 aaPredicted RBP12.84□□□□□ -0.35
RAB1A-201ENST00000398529 TESCQ96BS2 214 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 EFHD2Q96C19 240 aaPredicted RBP12.84□□□□□ -0.35
RAB1A-201ENST00000398529 CCT8L2Q96SF2 557 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 ZBTB18Q99592 522 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 DUSP26Q9BV47 211 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 REG4Q9BYZ8 158 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 ZNF385DQ9H6B1 395 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 PLSCR4Q9NRQ2 329 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 ATAD3AQ9NVI7 634 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 PAQR5Q9NXK6 330 aaPredicted RBP12.84□□□□□ -0.35
RAB1A-201ENST00000398529 MED11Q9P086 117 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 ABCG2Q9UNQ0 655 aa12.84□□□□□ -0.35
RAB1A-201ENST00000398529 OR2M5A3KFT3 312 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 SLC22A3O75751 556 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 SYNGR4O95473 234 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 LOXP28300 417 aaPredicted RBP12.83□□□□□ -0.36
RAB1A-201ENST00000398529 S100A3P33764 101 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 MPIP34949 423 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 FRKP42685 505 aaPredicted RBP12.83□□□□□ -0.36
RAB1A-201ENST00000398529 SUCLG1P53597 346 aaKnown RBP12.83□□□□□ -0.36
RAB1A-201ENST00000398529 STX5Q13190 355 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 DECR1Q16698 335 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 CHRFAM7AQ494W8 412 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 ZNF628Q5EBL2 1059 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 GTF2IRD2BQ6EKJ0 949 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 OR4F3Q6IEY1 312 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 GTF2IRD2Q86UP8 949 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 NATD1Q8N6N6 113 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 FADS6Q8N9I5 356 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 GLB1L3Q8NCI6 653 aaPredicted RBP12.83□□□□□ -0.36
RAB1A-201ENST00000398529 OR2M3Q8NG83 312 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 OR8J2Q8NGG1 315 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 OR5M1Q8NGP8 315 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 OR9I1Q8NGQ6 314 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 KAT2AQ92830 837 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 GMPPAQ96IJ6 420 aaPredicted RBP12.83□□□□□ -0.36
RAB1A-201ENST00000398529 VSTM2LQ96N03 204 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 BHLHE41Q9C0J9 482 aaPredicted RBP12.83□□□□□ -0.36
RAB1A-201ENST00000398529 ACTR6Q9GZN1 396 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 GLIPR2Q9H4G4 154 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 FOLH1BQ9HBA9 442 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 HHATLQ9HCP6 504 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 GLRX2Q9NS18 164 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 MCTS1Q9ULC4 181 aaKnown RBP12.83□□□□□ -0.36
RAB1A-201ENST00000398529 GPR52Q9Y2T5 361 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 ABCA1O95477 2261 aa12.83□□□□□ -0.36
RAB1A-201ENST00000398529 FAM234BA2RU67 622 aa12.82□□□□□ -0.36
RAB1A-201ENST00000398529 C9JVG2 144 aa12.82□□□□□ -0.36
RAB1A-201ENST00000398529 H0YC42 278 aa12.82□□□□□ -0.36
RAB1A-201ENST00000398529 COQ9O75208 318 aa12.82□□□□□ -0.36
RAB1A-201ENST00000398529 FAM107AO95990 144 aa12.82□□□□□ -0.36
RAB1A-201ENST00000398529 THBDP07204 575 aa12.82□□□□□ -0.36
RAB1A-201ENST00000398529 EFNA1P20827 205 aaPredicted RBP12.82□□□□□ -0.36
RAB1A-201ENST00000398529 EIF1AXP47813 144 aaKnown RBP12.82□□□□□ -0.36
RAB1A-201ENST00000398529 NCBP2P52298 156 aaKnown RBP eCLIP12.82□□□□□ -0.367e-18■■□□□ 12.1
RAB1A-201ENST00000398529 POLR2JP52435 117 aaKnown RBP12.82□□□□□ -0.36
RAB1A-201ENST00000398529 GAS1P54826 345 aa12.82□□□□□ -0.36
RAB1A-201ENST00000398529 PSMD4P55036 377 aaKnown RBP12.82□□□□□ -0.36
RAB1A-201ENST00000398529 TPD52P55327 224 aaPredicted RBP12.82□□□□□ -0.36
RAB1A-201ENST00000398529 CLDN20P56880 219 aa12.82□□□□□ -0.36
RAB1A-201ENST00000398529 PHC1P78364 1004 aa12.82□□□□□ -0.36
RAB1A-201ENST00000398529 ZNF155Q12901 538 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms