RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 OR4C11Q6IEV9 310 aa2.56□□□□□ -2
CHD9-202ENST00000398510 FBXL22Q6P050 247 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SBSNQ6UWP8 590 aa2.56□□□□□ -2
CHD9-202ENST00000398510 KCNK18Q7Z418 384 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ABI3BPQ7Z7G0 1075 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SCD5Q86SK9 330 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ZDHHC21Q8IVQ6 265 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SPATA6LQ8N4H0 392 aa2.56□□□□□ -2
CHD9-202ENST00000398510 C2CD4AQ8NCU7 369 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 LFNGQ8NES3 379 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SLC35B4Q969S0 331 aa2.56□□□□□ -2
CHD9-202ENST00000398510 DAZAP1Q96EP5 407 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 ZFP3Q96NJ6 502 aa2.56□□□□□ -2
CHD9-202ENST00000398510 OR2A14Q96R47 310 aa2.56□□□□□ -2
CHD9-202ENST00000398510 C16orf70Q9BSU1 422 aa2.56□□□□□ -2
CHD9-202ENST00000398510 LYRM4Q9HD34 91 aa2.56□□□□□ -2
CHD9-202ENST00000398510 PTTG3PQ9NZH4 202 aa2.56□□□□□ -2
CHD9-202ENST00000398510 MAB21L2Q9Y586 359 aa2.56□□□□□ -2
CHD9-202ENST00000398510 N6AMT1Q9Y5N5 214 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TNRC6AQ8NDV7 1962 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 A8MUI8 341 aa2.56□□□□□ -2
CHD9-202ENST00000398510 E9PI62 339 aa2.56□□□□□ -2
CHD9-202ENST00000398510 STK17BO94768 372 aa2.56□□□□□ -2
CHD9-202ENST00000398510 PRKCAP17252 672 aa2.56□□□□□ -2
CHD9-202ENST00000398510 PTPN6P29350 595 aa2.56□□□□□ -2
CHD9-202ENST00000398510 CSNK1A1P48729 337 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TBPL1P62380 186 aa2.56□□□□□ -2
CHD9-202ENST00000398510 GRK1Q15835 563 aa2.56□□□□□ -2
CHD9-202ENST00000398510 LDLRAD1Q5T700 205 aa2.56□□□□□ -2
CHD9-202ENST00000398510 FAM69AQ5T7M9 428 aa2.56□□□□□ -2
CHD9-202ENST00000398510 C17orf107Q6ZR85 190 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ZFAND4Q86XD8 727 aa2.56□□□□□ -2
CHD9-202ENST00000398510 MTMR8Q96EF0 704 aa2.56□□□□□ -2
CHD9-202ENST00000398510 NEIL1Q96FI4 390 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 UHRF2Q96PU4 802 aa2.56□□□□□ -2
CHD9-202ENST00000398510 MICU1Q9BPX6 476 aa2.56□□□□□ -2
CHD9-202ENST00000398510 PRDM12Q9H4Q4 367 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TPT1P8Q9HAU6 139 aa2.56□□□□□ -2
CHD9-202ENST00000398510 C1orf123Q9NWV4 160 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TCFL5Q9UL49 500 aa2.56□□□□□ -2
CHD9-202ENST00000398510 MN1Q10571 1320 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 PTPRZ1P23471 2315 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 HEATR5AQ86XA9 2040 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TRAPPC13A5PLN9 417 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TARM1B6A8C7 271 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TRAPPC2LH3BP13 241 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SCAMP2O15127 329 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 B4GALT2O60909 372 aa2.56□□□□□ -2
CHD9-202ENST00000398510 PSMG1O95456 288 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SLC2A2P11168 524 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 AOAHP28039 575 aa2.56□□□□□ -2
CHD9-202ENST00000398510 OTX2P32243 289 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ADH7P40394 386 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ELAVL1Q15717 326 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 NKG7Q16617 165 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SIRPB2Q5JXA9 342 aa2.56□□□□□ -2
CHD9-202ENST00000398510 THEM4Q5T1C6 240 aa2.56□□□□□ -2
CHD9-202ENST00000398510 PXDC1Q5TGL8 231 aa2.56□□□□□ -2
CHD9-202ENST00000398510 AWAT2Q6E213 333 aa2.56□□□□□ -2
CHD9-202ENST00000398510 LEG1Q6P5S2 330 aa2.56□□□□□ -2
CHD9-202ENST00000398510 HACD2Q6Y1H2 254 aa2.56□□□□□ -2
CHD9-202ENST00000398510 KLBQ86Z14 1044 aa2.56□□□□□ -2
CHD9-202ENST00000398510 MUC20Q8N307 709 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 CSNK2A3Q8NEV1 391 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ASB5Q8WWX0 329 aa2.56□□□□□ -2
CHD9-202ENST00000398510 APH1AQ96BI3 265 aa2.56□□□□□ -2
CHD9-202ENST00000398510 PTERQ96BW5 349 aa2.56□□□□□ -2
CHD9-202ENST00000398510 KIRREL1Q96J84 757 aa2.56□□□□□ -2
CHD9-202ENST00000398510 RADILQ96JH8 1075 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ARPC5LQ9BPX5 153 aa2.56□□□□□ -2
CHD9-202ENST00000398510 MED18Q9BUE0 208 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ACOT13Q9NPJ3 140 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ZNF701Q9NV72 531 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 LUZP4Q9P127 313 aa2.56□□□□□ -2
CHD9-202ENST00000398510 CHRNA9Q9UGM1 479 aa2.56□□□□□ -2
CHD9-202ENST00000398510 GABRPO00591 440 aa2.56□□□□□ -2
CHD9-202ENST00000398510 LCATP04180 440 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ACAA1P09110 424 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 RAB40ALP0C0E4 278 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ACP5P13686 325 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TIA1P31483 386 aaKnown RBP eCLIP2.56□□□□□ -26e-9■■■■■ 31.4
CHD9-202ENST00000398510 ABCG1P45844 678 aa2.56□□□□□ -2
CHD9-202ENST00000398510 RAB7AP51149 207 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ZNF266Q14584 549 aa2.56□□□□□ -2
CHD9-202ENST00000398510 CHRNA6Q15825 494 aa2.56□□□□□ -2
CHD9-202ENST00000398510 PPM1JQ5JR12 505 aa2.56□□□□□ -2
CHD9-202ENST00000398510 WIPI1Q5MNZ9 446 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 DPY19L2P2Q6ZN68 376 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SLC36A1Q7Z2H8 476 aa2.56□□□□□ -2
CHD9-202ENST00000398510 CAMKMTQ7Z624 323 aa2.56□□□□□ -2
CHD9-202ENST00000398510 GRASPQ7Z6J2 395 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 MKXQ8IYA7 352 aa2.56□□□□□ -2
CHD9-202ENST00000398510 OR2L13Q8N349 312 aa2.56□□□□□ -2
CHD9-202ENST00000398510 RNF175Q8N4F7 328 aa2.56□□□□□ -2
CHD9-202ENST00000398510 BANPQ8N9N5 519 aa2.56□□□□□ -2
CHD9-202ENST00000398510 OR13C8Q8NGS7 320 aa2.56□□□□□ -2
CHD9-202ENST00000398510 KCNG3Q8TAE7 436 aa2.56□□□□□ -2
CHD9-202ENST00000398510 GRHL3Q8TE85 626 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TRAPPC12Q8WVT3 735 aa2.56□□□□□ -2
CHD9-202ENST00000398510 RAB40AQ8WXH6 277 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms