RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TBXA2RP21731 343 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 CERS1P27544 350 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 OMPP47874 163 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 CDH11P55287 796 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 DLX2Q07687 328 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 KLHL26Q53HC5 615 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 KLHL17Q6TDP4 642 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 ATCAYQ86WG3 371 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 NANOGP1Q8N7R0 232 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 DCSTAMPQ9H295 470 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 IGFLR1Q9H665 355 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 C6orf106Q9H6K1 298 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 SACM1LQ9NTJ5 587 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF107Q9UII5 783 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 SSR3Q9UNL2 185 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 PRRC2CQ9Y520 2896 aaKnown RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 H3BSA7 217 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 H3BUI4 141 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 RTCAO00442 366 aaKnown RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 FAM20BO75063 409 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 ADORA3P0DMS8 318 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 TARDBPQ13148 414 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 B3GNT8Q7Z7M8 397 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 MCFD2Q8NI22 146 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 EDAQ92838 391 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 TPD52L3Q96J77 140 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 CEP19Q96LK0 163 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 KLHL21Q9UJP4 597 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 B3GALT5Q9Y2C3 310 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 EXOGQ9Y2C4 368 aaKnown RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 OR12D1P0DN82 309 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 SLC1A3P43003 542 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 COX20Q5RI15 118 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 TMEM179BQ7Z7N9 219 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 GPR174Q9BXC1 333 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 SH2B3Q9UQQ2 575 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 LSM2Q9Y333 95 aaKnown RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 SCGNO76038 276 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 FNTBP49356 437 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 IST1P53990 364 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 RAB8AP61006 207 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 CCDC116Q8IYX3 515 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 BPIFB6Q8NFQ5 453 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 OR7G2Q8NG99 324 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 RPS4Y2Q8TD47 263 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 CNOT9Q92600 299 aaKnown RBP5.43□□□□□ -1.54
PTPRD-206ENST00000397617 MYO9AB2RTY4 2548 aa5.43□□□□□ -1.54
PTPRD-206ENST00000397617 FAM170BA6NMN3 283 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 hCG_2039718K7EN88 272 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 HRO43593 1189 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 FGF17O60258 216 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF254O75437 659 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 SERPINI2O75830 405 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 APOC1P02654 83 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 CD36P16671 472 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 PGCP20142 388 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 MC1RQ01726 317 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 RUNX2Q13950 521 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 SYPL1Q16563 259 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 AMZ1Q400G9 498 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 FGD3Q5JSP0 725 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 DCST2Q5T1A1 773 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 PODNL1Q6PEZ8 512 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 PHC2Q8IXK0 858 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ARHGAP9Q9BRR9 750 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 IRF2BPLQ9H1B7 796 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ANKRA2Q9H9E1 313 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 VNN3Q9NY84 501 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 H2AFY2Q9P0M6 372 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF443Q9Y2A4 671 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF337Q9Y3M9 751 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 SNX8Q9Y5X2 465 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 NUP210LQ5VU65 1888 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 A0A0U1RQS6 177 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 SERINC4A6NH21 518 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 OR6C65A6NJZ3 312 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 H3BMH7 237 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 BMXP51813 675 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 DUSP5Q16690 384 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 DUS1LQ6P1R4 473 aaKnown RBP5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF517Q6ZMY9 492 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-206ENST00000397617 GRINAQ7Z429 371 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 OR2T4Q8NH00 348 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ADAM19Q9H013 955 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ATPIF1Q9UII2 106 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 A0A1W2PPW3 197 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ACOD1A6NK06 481 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 B4GALT2O60909 372 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 OR2B3O76000 313 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 MT-ND5P03915 603 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 MASP1P48740 699 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 BTN3A2P78410 334 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 FUT5Q11128 374 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 TEX30Q5JUR7 227 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 DBX2Q6ZNG2 339 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 SMYD1Q8NB12 490 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 AGBL5Q8NDL9 886 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 AKIP1Q9NQ31 210 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 FAIMQ9NVQ4 179 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 NPAP1Q9NZP6 1156 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms