RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 C17orf47Q8NEP4 570 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 OR5M3Q8NGP4 307 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 NKX3-1Q99801 234 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 PINK1Q9BXM7 581 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 ARL6Q9H0F7 186 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 SYNPO2LQ9H987 977 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 TBC1D3DA0A087WVF3 549 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 TBC1D3IA0A087WXS9 549 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 TBC1D3EA0A087X179 549 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 TBC1D3KA0A087X1G2 549 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 TBC1D3FA6NER0 549 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 TBC1D3LB9A6J9 549 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 C1QTNF3-AMACRE9PGA6 284 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 TBC1D3HP0C7X1 549 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 TLX1P31314 330 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 CDK5Q00535 292 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 ZBTB37Q5TC79 503 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 TBC1D3GQ6DHY5 549 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 TBC1D3CQ6IPX1 549 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 PYHIN1Q6K0P9 492 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 UBE2Q1Q7Z7E8 422 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 TBC1D3Q8IZP1 549 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 SMPDL3BQ92485 455 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 PTCHD1Q96NR3 888 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 HHIPQ96QV1 700 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 TAS2R10Q9NYW0 307 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 POLHQ9Y253 713 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 MED31Q9Y3C7 131 aa13.71□□□□□ -0.21
RAPGEF4-201ENST00000397081 A8MVJ9 347 aa13.71□□□□□ -0.22
RAPGEF4-201ENST00000397081 ZNF3P17036 446 aa13.71□□□□□ -0.22
RAPGEF4-201ENST00000397081 ZNF155Q12901 538 aaPredicted RBP13.71□□□□□ -0.22
RAPGEF4-201ENST00000397081 SEMA4CQ9C0C4 833 aa13.71□□□□□ -0.22
RAPGEF4-201ENST00000397081 MYEF2Q9P2K5 600 aaKnown RBP13.71□□□□□ -0.22
RAPGEF4-201ENST00000397081 TESQ9UGI8 421 aaKnown RBP13.71□□□□□ -0.22
RAPGEF4-201ENST00000397081 PHF11Q9UIL8 331 aa13.71□□□□□ -0.22
RAPGEF4-201ENST00000397081 STK25O00506 426 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 GBX2P52951 348 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 DUSP2Q05923 314 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 GRK1Q15835 563 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 PUS10Q3MIT2 529 aaKnown RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 TMEM201Q5SNT2 666 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 FBXO46Q6PJ61 603 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 FAM111BQ6SJ93 734 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 TEX261Q6UWH6 196 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 TMED4Q7Z7H5 227 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 OR11H7Q8NGC8 314 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 MARVELD1Q9BSK0 173 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 PRDM9Q9NQV7 894 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 MAN2C1Q9NTJ4 1040 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 BAIAP2Q9UQB8 552 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 U3KQ87 197 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 BLOC1S5-TXNDC5H3BN57 136 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 PXNP49023 591 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 CSNK1G2P78368 415 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 GALEQ14376 348 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 EXOSC7Q15024 291 aaKnown RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 LSM14AQ8ND56 463 aaKnown RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 LGALS14Q8TCE9 139 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 THAP4Q8WY91 577 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 BADQ92934 168 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 CALML5Q9NZT1 146 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 VWA8A3KMH1 1905 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 A0A1W2PP55 124 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 UBE2QL1A1L167 161 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 LGALS8O00214 317 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 SURF4O15260 269 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 AHCYP23526 432 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 AK4P27144 223 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 GDNFP39905 211 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 BCL6P41182 706 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 EPHA5P54756 1037 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 GET4Q7L5D6 327 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 HDDC2Q7Z4H3 204 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 GJD3Q8N144 294 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 HDDC3Q8N4P3 179 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 DERL3Q96Q80 235 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 INSM2Q96T92 566 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 RSPO3Q9BXY4 272 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 SIDT1Q9NXL6 827 aaKnown RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 PATJQ8NI35 1801 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 UNC80Q8N2C7 3258 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 GABRA3P34903 492 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 STAT5AP42229 794 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 PER3P56645 1201 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 RGS1Q08116 209 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 HSD17B12Q53GQ0 312 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 C19orf48Q6RUI8 117 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 VITQ6UXI7 678 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 ERN2Q76MJ5 926 aaKnown RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 MEPCEQ7L2J0 689 aaKnown RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 C12orf40Q86WS4 652 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 ACOT12Q8WYK0 555 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 NKD1Q969G9 470 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 KIAA1143Q96AT1 154 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 HSPA12BQ96MM6 686 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 CCDC3Q9BQI4 270 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 CFHR5Q9BXR6 569 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 ENKD1Q9H0I2 346 aa13.7□□□□□ -0.22
RAPGEF4-201ENST00000397081 C20orf141Q9NUB4 165 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms