RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 A0A1W2PRB8 838 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 SDHDO14521 159 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 SCAMP2O15127 329 aaKnown RBP14.58□□□□□ -0.08
CLTA-203ENST00000396603 AKAP10O43572 662 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 IGKV1D-16P01601 117 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 THBDP07204 575 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 ADH6P28332 368 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 RFX3P48380 749 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 CLNS1AP54105 237 aaKnown RBP14.58□□□□□ -0.08
CLTA-203ENST00000396603 C21orf58P58505 322 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 HSPB3Q12988 150 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 MLC1Q15049 377 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 ETFDHQ16134 617 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 PLPPR5Q32ZL2 321 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 EXOSC6Q5RKV6 272 aaKnown RBP14.58□□□□□ -0.08
CLTA-203ENST00000396603 NXNQ6DKJ4 435 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 ADAM5Q6NVV9 412 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 ZNF704Q6ZNC4 412 aaPredicted RBP14.58□□□□□ -0.08
CLTA-203ENST00000396603 Q71RC1 249 aaPredicted RBP14.58□□□□□ -0.08
CLTA-203ENST00000396603 ZNF551Q7Z340 670 aaPredicted RBP14.58□□□□□ -0.08
CLTA-203ENST00000396603 MTERF4Q7Z6M4 381 aaKnown RBP14.58□□□□□ -0.08
CLTA-203ENST00000396603 OR2V1Q8NHB1 315 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 CLHC1Q8NHS4 586 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 PIK3R3Q92569 461 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 GIMAP5Q96F15 307 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 ZC3HAV1LQ96H79 300 aaKnown RBP14.58□□□□□ -0.08
CLTA-203ENST00000396603 EGLN2Q96KS0 407 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 HDHD5Q9BXW7 423 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 MED17Q9NVC6 651 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 GIMAP2Q9UG22 337 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 BAIAP2L1Q9UHR4 511 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 ATP6V1HQ9UI12 483 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 VDAC3Q9Y277 283 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 SNX8Q9Y5X2 465 aa14.58□□□□□ -0.08
CLTA-203ENST00000396603 GXYLT2A0PJZ3 443 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 POLR3GO15318 223 aaPredicted RBP14.57□□□□□ -0.08
CLTA-203ENST00000396603 KCNK2O95069 426 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 CNOT4O95628 575 aaKnown RBP14.57□□□□□ -0.08
CLTA-203ENST00000396603 G6PDP11413 515 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 IDO1P14902 403 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 HPGDP15428 266 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 SLC6A8P48029 635 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 MANFP55145 182 aaKnown RBP14.57□□□□□ -0.08
CLTA-203ENST00000396603 CLDN8P56748 225 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 IRX1P78414 480 aaPredicted RBP14.57□□□□□ -0.08
CLTA-203ENST00000396603 RNPS1Q15287 305 aaKnown RBP14.57□□□□□ -0.08
CLTA-203ENST00000396603 DPY19L1Q2PZI1 675 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 MFSD12Q6NUT3 480 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 C22orf34Q6ZV56 151 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 CIARTQ8N365 385 aaPredicted RBP14.57□□□□□ -0.08
CLTA-203ENST00000396603 NUP43Q8NFH3 380 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 STEAP2Q8NFT2 490 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 OR4C3Q8NH37 302 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 MAELQ96JY0 434 aaKnown RBP14.57□□□□□ -0.08
CLTA-203ENST00000396603 STACQ99469 402 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 DPY30Q9C005 99 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 SLCO1B3Q9NPD5 702 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 EQTNQ9NQ60 294 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 TIGARQ9NQ88 270 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 DUSP22Q9NRW4 184 aa14.57□□□□□ -0.08
CLTA-203ENST00000396603 FN1P02751 2386 aaKnown RBP14.56□□□□□ -0.08
CLTA-203ENST00000396603 GJE1A6NN92 205 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 SCDO00767 359 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 HS3ST1O14792 307 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 NID1P14543 1247 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 EPHA3P29320 983 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 PRIM2P49643 509 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 SUMO3P55854 103 aaPredicted RBP14.56□□□□□ -0.08
CLTA-203ENST00000396603 PPP2R2BQ00005 443 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 PTGR1Q14914 329 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 GSTA3Q16772 222 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 EXOC3L2Q2M3D2 409 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 SSX8Q7RTT4 187 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 GALNT10Q86SR1 603 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 VPS37AQ8NEZ2 397 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 RNF128Q8TEB7 428 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 STON2Q8WXE9 905 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 SLC9A6Q92581 669 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 CPNE4Q96A23 557 aaPredicted RBP14.56□□□□□ -0.08
CLTA-203ENST00000396603 KLHL15Q96M94 604 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 RNF145Q96MT1 663 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 ZBTB18Q99592 522 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 TACO1Q9BSH4 297 aaKnown RBP14.56□□□□□ -0.08
CLTA-203ENST00000396603 ACTR6Q9GZN1 396 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 NGBQ9NPG2 151 aa14.56□□□□□ -0.08
CLTA-203ENST00000396603 GOLGA8QA0A0J9YX86 632 aa14.55□□□□□ -0.08
CLTA-203ENST00000396603 GOLGA8OA6NCC3 632 aa14.55□□□□□ -0.08
CLTA-203ENST00000396603 GOLGA8NF8WBI6 632 aa14.55□□□□□ -0.08
CLTA-203ENST00000396603 CXCL13O43927 109 aa14.55□□□□□ -0.08
CLTA-203ENST00000396603 ALOX5P09917 674 aa14.55□□□□□ -0.08
CLTA-203ENST00000396603 LINGO3P0C6S8 592 aa14.55□□□□□ -0.08
CLTA-203ENST00000396603 TROVE2P10155 538 aaKnown RBP eCLIP14.55□□□□□ -0.08
CLTA-203ENST00000396603 ACP2P11117 423 aa14.55□□□□□ -0.08
CLTA-203ENST00000396603 AGTR1P30556 359 aa14.55□□□□□ -0.08
CLTA-203ENST00000396603 LSM12Q3MHD2 195 aaKnown RBP14.55□□□□□ -0.08
CLTA-203ENST00000396603 ANKRD34AQ69YU3 496 aa14.55□□□□□ -0.08
CLTA-203ENST00000396603 HBMQ6B0K9 141 aa14.55□□□□□ -0.08
CLTA-203ENST00000396603 EPGNQ6UW88 154 aa14.55□□□□□ -0.08
CLTA-203ENST00000396603 ZNF527Q8NB42 609 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms