RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ADAMTSL3P82987 1691 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SLC22A5O76082 557 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SERPINA5P05154 406 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 HMGN2P05204 90 aaKnown RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 GPX3P22352 226 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 DCTP40126 519 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 ENTPD8Q5MY95 495 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 MFSD6LQ8IWD5 586 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SYNPRQ8TBG9 265 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 UPRTQ96BW1 309 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 C4orf36Q96KX1 117 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 B3GNT2Q9NY97 397 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 LRFN1Q9P244 771 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 WIF1Q9Y5W5 379 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CSNK1G3Q9Y6M4 447 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 B4DXG7 233 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 M0R3H8 397 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 NARSO43776 548 aaKnown RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CDK1P06493 297 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 UGT2B7P16662 529 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 MMP12P39900 470 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 EFNA3P52797 238 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 LBX1P52954 281 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 NCS1P62166 190 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 PPA1Q15181 289 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 OR7A5Q15622 319 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 HSF5Q4G112 596 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 MANEAQ5SRI9 462 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SBSNQ6UWP8 590 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SCD5Q86SK9 330 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 PPP1R3BQ86XI6 285 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 RHBDD1Q8TEB9 315 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 LMF1Q96S06 567 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 DHRS4Q9BTZ2 278 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 POT1Q9NUX5 634 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 LRIT1Q9P2V4 623 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 PTRH2Q9Y3E5 179 aaKnown RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 V9GY05 133 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 NSG1A0A0A6YYJ2 146 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MYOCOSA0A1B0GUC4 107 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SGK494L7N484 410 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 YKT6O15498 198 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 RAB3DO95716 219 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 IGHG1P01857 330 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 CAMLGP49069 296 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 RBPJQ06330 500 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 CCDC58Q4VC31 144 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 DPY19L2P1Q6NXN4 242 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MMP21Q8N119 569 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SLC39A11Q8N1S5 342 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MYLIPQ8WY64 445 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ITPKCQ96DU7 683 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SLC41A2Q96JW4 573 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 CLSTN3Q9BQT9 956 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 HEBP1Q9NRV9 189 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 AGPAT4Q9NRZ5 378 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 CUEDC1Q9NWM3 386 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 PAQR5Q9NXK6 330 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 GLTPQ9NZD2 209 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TRAV18A0A075B6X5 111 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MROH6A6NGR9 719 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 LYRM1O43325 122 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 IL4RP24394 825 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SOX3P41225 446 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 WDR5P61964 334 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 GGTA1PQ4G0N0 100 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 DCAF12Q5T6F0 453 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 KDELC1Q6UW63 502 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF765Q7L2R6 523 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ARL11Q969Q4 196 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MUL1Q969V5 352 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TOX2Q96NM4 488 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 LINC00597Q9H2U6 94 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 C1orf198Q9H425 327 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 DNAJB11Q9UBS4 358 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 HHLA2Q9UM44 414 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 VDAC3Q9Y277 283 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 OR5K3A6NET4 321 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 OTOL1A6NHN0 477 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 GABRR3A8MPY1 467 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 H0YIV9 168 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TOR1AO14656 332 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SMAD6O43541 496 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 GLSO94925 669 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SERPINE2P07093 398 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 CEBPBP17676 345 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MAOAP21397 527 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 PRDX1Q06830 199 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MLLT11Q13015 90 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ACSM3Q53FZ2 586 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 HMGN2P46Q86SG4 172 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 TPRA1Q86W33 373 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 SORT1Q99523 831 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 THSD1Q9NS62 852 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 MED17Q9NVC6 651 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 HCFC1R1Q9NWW0 138 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 VAPAQ9P0L0 249 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 IL20RAQ9UHF4 553 aa5.12□□□□□ -1.59
VPS13C-204ENST00000395898 INTS6Q9UL03 887 aaKnown RBP5.12□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF443Q9Y2A4 671 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms