RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 TRAF6Q9Y4K3 522 aa17.15■□□□□ 0.34
COL11A2-204ENST00000395194 ABCA1O95477 2261 aa17.15■□□□□ 0.34
COL11A2-204ENST00000395194 ALPK2Q86TB3 2170 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 TMEM114B3SHH9 223 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 CLOCKO15516 846 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 GCM2O75603 506 aaPredicted RBP17.14■□□□□ 0.33
COL11A2-204ENST00000395194 C6orf47O95873 294 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 ELK4P28324 431 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 LCN1P31025 176 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 EIF1P41567 113 aaKnown RBP17.14■□□□□ 0.33
COL11A2-204ENST00000395194 CCT3P49368 545 aaKnown RBP17.14■□□□□ 0.33
COL11A2-204ENST00000395194 CCR4P51679 360 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 PPP2R2BQ00005 443 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 CAPRIN1Q14444 709 aaKnown RBP17.14■□□□□ 0.33
COL11A2-204ENST00000395194 UGT3A2Q3SY77 523 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 ARL13AQ5H913 290 aaPredicted RBP17.14■□□□□ 0.33
COL11A2-204ENST00000395194 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.14■□□□□ 0.33
COL11A2-204ENST00000395194 GTF2IRD2BQ6EKJ0 949 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 TFAP2EQ6VUC0 442 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 FCRLAQ7L513 359 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 ATG4DQ86TL0 474 aaPredicted RBP17.14■□□□□ 0.33
COL11A2-204ENST00000395194 GTF2IRD2Q86UP8 949 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 KRTCAP2Q8N6L1 136 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 TMCO5AQ8N6Q1 288 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 ZNF611Q8N823 705 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 MAPK1IP1LQ8NDC0 245 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 OR5AK3PQ8NH89 298 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 ADAMTS15Q8TE58 950 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 NEUROG1Q92886 237 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 APOPT1Q96IL0 206 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 TMEM204Q9BSN7 226 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 ACTRT3Q9BYD9 372 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 ANKZF1Q9H8Y5 726 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 KLHL13Q9P2N7 655 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 SLC17A7Q9P2U7 560 aa17.14■□□□□ 0.33
COL11A2-204ENST00000395194 CHD3Q12873 2000 aaKnown RBP17.14■□□□□ 0.33
COL11A2-204ENST00000395194 A0A1W2PNR3 127 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 GTPBP1O00178 669 aaKnown RBP17.13■□□□□ 0.33
COL11A2-204ENST00000395194 ZNF195O14628 629 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 SPAG7O75391 227 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 SKAP2O75563 359 aaPredicted RBP17.13■□□□□ 0.33
COL11A2-204ENST00000395194 SLU7O95391 586 aaKnown RBP17.13■□□□□ 0.33
COL11A2-204ENST00000395194 PABPC4LP0CB38 370 aaKnown RBP17.13■□□□□ 0.33
COL11A2-204ENST00000395194 IL32P24001 234 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 P2RX1P51575 399 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 MLC1Q15049 377 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 GABRG1Q8N1C3 465 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 BANPQ8N9N5 519 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 ZNF527Q8NB42 609 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 STEAP2Q8NFT2 490 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 OR5D16Q8NGK9 328 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 ZFP90Q8TF47 636 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 CPNE4Q96A23 557 aaPredicted RBP17.13■□□□□ 0.33
COL11A2-204ENST00000395194 ZNF524Q96C55 264 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 C3orf30Q96M34 536 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 ZNF701Q9NV72 531 aaPredicted RBP17.13■□□□□ 0.33
COL11A2-204ENST00000395194 GPATCH2Q9NW75 528 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 ICAM5Q9UMF0 924 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 FAF1Q9UNN5 650 aaPredicted RBP17.13■□□□□ 0.33
COL11A2-204ENST00000395194 PLCE1Q9P212 2302 aa17.13■□□□□ 0.33
COL11A2-204ENST00000395194 CFLARO15519 480 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 NPHS1O60500 1241 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 HSPA4LO95757 839 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 DDX5P17844 614 aaKnown RBP17.12■□□□□ 0.33
COL11A2-204ENST00000395194 ENPP1P22413 925 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 MAPK1P28482 360 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 SOAT1P35610 550 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 RPS26P62854 115 aaKnown RBP17.12■□□□□ 0.33
COL11A2-204ENST00000395194 RNPS1Q15287 305 aaKnown RBP17.12■□□□□ 0.33
COL11A2-204ENST00000395194 TAB1Q15750 504 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 ATP6AP1LQ52LC2 224 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 KLHL26Q53HC5 615 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 OLIG3Q7RTU3 272 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.12■□□□□ 0.33
COL11A2-204ENST00000395194 MTERF4Q7Z6M4 381 aaKnown RBP17.12■□□□□ 0.33
COL11A2-204ENST00000395194 OR56A1Q8NGH5 318 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 GPR119Q8TDV5 335 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 OR5P2Q8WZ92 322 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 PPP3R2Q96LZ3 170 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 MDFIQ99750 246 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 PPCSQ9HAB8 311 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 TIGARQ9NQ88 270 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 RNF115Q9Y4L5 304 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 ATRQ13535 2644 aa17.12■□□□□ 0.33
COL11A2-204ENST00000395194 C9JVG2 144 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 H3BNH8 94 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 ADAP00813 363 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 FGF4P08620 206 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 PRKCAP17252 672 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 SLC7A1P30825 629 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 ARRB2P32121 409 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 TNK1Q13470 666 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 VEZF1Q14119 521 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 XKR7Q5GH72 579 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 SFRP5Q5T4F7 317 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 IL23RQ5VWK5 629 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 FNDC5Q8NAU1 212 aa17.11■□□□□ 0.33
COL11A2-204ENST00000395194 LILRB1Q8NHL6 650 aaPredicted RBP17.11■□□□□ 0.33
COL11A2-204ENST00000395194 ZNF775Q96BV0 537 aaPredicted RBP17.11■□□□□ 0.33
COL11A2-204ENST00000395194 OR7D2Q96RA2 312 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms