RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 LMF1Q96S06 567 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 PLEKHA6Q9Y2H5 1048 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 PPIL1Q9Y3C6 166 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 TRPM6Q9BX84 2022 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 C1QTNF3-AMACRE9PGA6 284 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 SLC22A5O76082 557 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 NFATC1O95644 943 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 GABRA3P34903 492 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 PTH2RP49190 550 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 GALNTL5Q7Z4T8 443 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 OR56A3Q8NH54 315 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 FGF13Q92913 245 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 CHST8Q9H2A9 424 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 MYNNQ9NPC7 610 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 KCMF1Q9P0J7 381 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 IRGMA1A4Y4 181 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 CHRM4P08173 479 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 DDX6P26196 483 aaKnown RBP eCLIP12.33□□□□□ -0.44
NFKB1-202ENST00000394820 GABRA5P31644 462 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 NUP62P37198 522 aaPredicted RBP12.33□□□□□ -0.44
NFKB1-202ENST00000394820 RAB40BQ12829 278 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 GRK1Q15835 563 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 DEFB110Q30KQ9 67 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 HNRNPA1L2Q32P51 320 aaKnown RBP12.33□□□□□ -0.44
NFKB1-202ENST00000394820 CDKL4Q5MAI5 379 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 GPR155Q7Z3F1 870 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 ZNF547Q8IVP9 402 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 LNX2Q8N448 690 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 DNAJA4Q8WW22 397 aaPredicted RBP12.33□□□□□ -0.44
NFKB1-202ENST00000394820 SLC25A36Q96CQ1 311 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 CHFRQ96EP1 664 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 OR14A2Q96R54 314 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 B3GNT4Q9C0J1 378 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 MS4A7Q9GZW8 240 aaPredicted RBP12.33□□□□□ -0.44
NFKB1-202ENST00000394820 BABAM2Q9NXR7 383 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 ASIC5Q9NY37 505 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 DIMT1Q9UNQ2 313 aaKnown RBP12.33□□□□□ -0.44
NFKB1-202ENST00000394820 A3GALT2U3KPV4 340 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 TVP23AA6NH52 213 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 ELOA3DA6NLF2 546 aaPredicted RBP12.32□□□□□ -0.44
NFKB1-202ENST00000394820 B4GALT2O60909 372 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 MSL3P1P0C860 447 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 TYRP1P17643 537 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 C4BPBP20851 252 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 F8A1P23610 371 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 VAMP1P23763 118 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 STAT5AP42229 794 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 EVX1P49640 407 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 GBX2P52951 348 aaPredicted RBP12.32□□□□□ -0.44
NFKB1-202ENST00000394820 GPM6BQ13491 265 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 KCNC3Q14003 757 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 CRMP1Q14194 572 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 ELAVL3Q14576 367 aaKnown RBP12.32□□□□□ -0.44
NFKB1-202ENST00000394820 TAF13Q15543 124 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 ELOA3BQ3SY89 546 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 TMEM69Q5SWH9 247 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 LINC00299Q6ZSB3 139 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 FCRLAQ7L513 359 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 ACOT4Q8N9L9 421 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 DNAAF1Q8NEP3 725 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 ELOA3Q8NG57 546 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 OR5J2Q8NH18 312 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 PFN4Q8NHR9 129 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 VOPP1Q96AW1 172 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 MNTQ99583 582 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 RANBP3Q9H6Z4 567 aaPredicted RBP12.32□□□□□ -0.44
NFKB1-202ENST00000394820 FBXL2Q9UKC9 423 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 EDDM13A0A1B0GTR0 161 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 A0A1W2PRQ8 180 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 E9PI62 339 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 KHNYNO15037 678 aaKnown RBP12.32□□□□□ -0.44
NFKB1-202ENST00000394820 POLR2CP19387 275 aaPredicted RBP12.32□□□□□ -0.44
NFKB1-202ENST00000394820 NPR2P20594 1047 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 ACTR1BP42025 376 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 ACTR1AP61163 376 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 TDGQ13569 410 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 LIN54Q6MZP7 749 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 FAM111BQ6SJ93 734 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 APOOLQ6UXV4 268 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 ZBTB44Q8NCP5 570 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 ZDHHC1Q8WTX9 485 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 NXPE2Q96DL1 559 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 C6orf106Q9H6K1 298 aaPredicted RBP12.32□□□□□ -0.44
NFKB1-202ENST00000394820 KLHL42Q9P2K6 505 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 KLHL21Q9UJP4 597 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 TP53BP1Q12888 1972 aaPredicted RBP12.32□□□□□ -0.44
NFKB1-202ENST00000394820 SVILO95425 2214 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 OR2W5A6NFC9 320 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 KIAA0355O15063 1070 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 C1QBP02746 253 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 ANXA7P20073 488 aaKnown RBP12.32□□□□□ -0.44
NFKB1-202ENST00000394820 C17orf107Q6ZR85 190 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 TMPRSS9Q7Z410 1059 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 CLDN22Q8N7P3 220 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 POGLUT1Q8NBL1 392 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 SUN3Q8TAQ9 357 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 PDXPQ96GD0 296 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 CA5BQ9Y2D0 317 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 MED31Q9Y3C7 131 aa12.32□□□□□ -0.44
NFKB1-202ENST00000394820 C13orf42A0A1B0GVH6 325 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms