RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 RAB36O95755 333 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 S1PR1P21453 382 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 PAICSP22234 425 aaKnown RBP10.29□□□□□ -0.76
TCOF1-203ENST00000394269 NUDT1P36639 197 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 ZP2Q05996 745 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 ZNF846Q147U1 533 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 NCF4Q15080 339 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 TRIM16LQ309B1 348 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 USP43Q70EL4 1123 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 BMP8AQ7Z5Y6 402 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 OAFQ86UD1 273 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 LAPTM4BQ86VI4 370 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 ZNF687Q8N1G0 1237 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 SDR16C5Q8N3Y7 309 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 OR5M3Q8NGP4 307 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 OR2I1PQ8NGU4 316 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 PHOSPHO1Q8TCT1 267 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 CTHRC1Q96CG8 243 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 CEP19Q96LK0 163 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 TNFRSF13CQ96RJ3 184 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 ADOQ96SZ5 270 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 KRCC1Q9NPI7 259 aaPredicted RBP10.29□□□□□ -0.76
TCOF1-203ENST00000394269 GPR27Q9NS67 375 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 NTMQ9P121 344 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 PI4KAP42356 2102 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 IGHV3-20A0A0C4DH32 117 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 TRIM64BA6NI03 449 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 CTDSP2O14595 271 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 TBX1O43435 398 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 MRPS14O60783 128 aaKnown RBP10.29□□□□□ -0.76
TCOF1-203ENST00000394269 NUDT14O95848 222 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 INHBBP09529 407 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 COPZ1P61923 177 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 RGS21Q2M5E4 152 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 C22orf42Q6IC83 251 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 NPSR1Q6W5P4 371 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 THSD4Q6ZMP0 1018 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 ZNF595Q8IYB9 648 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 LRRC17Q8N6Y2 441 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 CADM4Q8NFZ8 388 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 STACQ99469 402 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 NDC1Q9BTX1 674 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 ASPNQ9BXN1 380 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 FLRT3Q9NZU0 649 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 WNT16Q9UBV4 365 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 MKL2Q9ULH7 1088 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 CBLCQ9ULV8 474 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 C17orf51A8MQB3 221 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 PRODHO43272 600 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 CFIP05156 583 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 CLUP10909 449 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 FPR3P25089 353 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 RPL4P36578 427 aaKnown RBP10.28□□□□□ -0.76
TCOF1-203ENST00000394269 STAT5AP42229 794 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 CRTC2Q53ET0 693 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-203ENST00000394269 ZNF620Q6ZNG0 422 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 TMEM151BQ8IW70 566 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 CENPSQ8N2Z9 138 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 KBTBD8Q8NFY9 601 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 OR6C4Q8NGE1 309 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 PIGKQ92643 395 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 DEPDC7Q96QD5 511 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 PRSS27Q9BQR3 290 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 TMED9Q9BVK6 235 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 PRRG3Q9BZD7 231 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 HINT3Q9NQE9 182 aaKnown RBP10.28□□□□□ -0.76
TCOF1-203ENST00000394269 FBXL4Q9UKA2 621 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 CAB39Q9Y376 341 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-203ENST00000394269 IGHV1OR21-1A0A087WYE8 117 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 GTPBP1O00178 669 aaKnown RBP10.28□□□□□ -0.76
TCOF1-203ENST00000394269 NKX2-2O95096 273 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 HNRNPCP07910 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
TCOF1-203ENST00000394269 CELP19835 753 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 POU3F3P20264 500 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-203ENST00000394269 GTF2E2P29084 291 aaKnown RBP10.28□□□□□ -0.76
TCOF1-203ENST00000394269 SLC15A1P46059 708 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 RELAQ04206 551 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 PGGHGQ32M88 737 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 KLHL22Q53GT1 634 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 ARHGAP40Q5TG30 622 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 MEDAGQ5VYS4 303 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 MED25Q71SY5 747 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 OR10H4Q8NGA5 316 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 OR6Q1Q8NGQ2 317 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 TRMT61AQ96FX7 289 aaKnown RBP10.28□□□□□ -0.76
TCOF1-203ENST00000394269 NELL2Q99435 816 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 HDHD5Q9BXW7 423 aa10.28□□□□□ -0.76
TCOF1-203ENST00000394269 PLD2O14939 933 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 HRO43593 1189 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 PRAMEF2O60811 474 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 PPP1R3DO95685 299 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 THBS1P07996 1170 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 CT45A8P0DMV1 189 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 CT45A9P0DMV2 189 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 ITPKBP27987 946 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 CAV3P56539 151 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 HSD11B2P80365 405 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 CFHR1Q03591 330 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 INSL4Q14641 139 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 IRF3Q14653 427 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms