RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 GABRA3P34903 492 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 GRM5P41594 1212 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 DGKEP52429 567 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 REEP5Q00765 189 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 ENDOGQ14249 297 aaKnown RBP12.7□□□□□ -0.38
USP49-203ENST00000394253 SPCS2Q15005 226 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 EARS2Q5JPH6 523 aaKnown RBP12.7□□□□□ -0.38
USP49-203ENST00000394253 RAET1LQ5VY80 246 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 CILP2Q8IUL8 1156 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 DTX3Q8N9I9 347 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 OR51A7Q8NH64 312 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 ESRP2Q9H6T0 727 aaKnown RBP12.7□□□□□ -0.38
USP49-203ENST00000394253 hCG_1809904A0A1W2PP81 198 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 A0A1W2PPE2 198 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 A0A1W2PR64 198 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 A0A1W2PRV1 198 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 GABRA4P48169 554 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 RPS13P62277 151 aaKnown RBP12.7□□□□□ -0.38
USP49-203ENST00000394253 SF3B4Q15427 424 aaKnown RBP eCLIP12.7□□□□□ -0.38
USP49-203ENST00000394253 STRADBQ9C0K7 418 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 KCMF1Q9P0J7 381 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 SLC22A7Q9Y694 548 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 SOX3P41225 446 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 KEAP1Q14145 624 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 SLX4IPQ5VYV7 408 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 OR9A1PQ8NGU1 263 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 RBPMSQ93062 196 aaKnown RBP12.69□□□□□ -0.38
USP49-203ENST00000394253 HRH3Q9Y5N1 445 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 E9PCH4 1651 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 CRYM-AS1A6NIL9 109 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 H3BMQ9 156 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 K7ERQ8 282 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 XRCC3O43542 346 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 ADH4P08319 380 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 SMIM17P0DL12 118 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 CBLP22681 906 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 SSTR2P30874 369 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 MRPL19P49406 292 aaKnown RBP12.69□□□□□ -0.38
USP49-203ENST00000394253 NDFIP1Q9BT67 221 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 TMEM59Q9BXS4 323 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 GPR4P46093 362 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 LAPTM4AQ15012 233 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 ACSM3Q53FZ2 586 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 SLC35D2Q76EJ3 337 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 RNF150Q9ULK6 438 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 ZCCHC11Q5TAX3 1644 aaKnown RBP12.69□□□□□ -0.38
USP49-203ENST00000394253 ADAM11O75078 769 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 EEF1DP3Q658K8 133 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 ABLIM2Q6H8Q1 611 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 FRMD1Q8N878 549 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 DBF4BQ8NFT6 615 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 OR4A16Q8NH70 328 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 GPR152Q8TDT2 470 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 IL1F10Q8WWZ1 152 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 SENP5Q96HI0 755 aaPredicted RBP12.69□□□□□ -0.38
USP49-203ENST00000394253 A6NIZ1 184 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 G3V3Q6 166 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 HPGDSO60760 199 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 GRPRP30550 384 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 RAP1BP61224 184 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 RAC1P63000 192 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 SHEQ5VZ18 495 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 MBLAC2Q68D91 279 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 OR4N2Q8NGD1 307 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 HHIPL1Q96JK4 782 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 LIN7BQ9HAP6 207 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 EMC7Q9NPA0 242 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 MRPL22Q9NWU5 206 aaKnown RBP12.69□□□□□ -0.38
USP49-203ENST00000394253 OSGIN2Q9Y236 505 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 SERPINA2P20848 420 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 CATR1Q13166 79 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 TBCEQ15813 527 aaPredicted RBP12.69□□□□□ -0.38
USP49-203ENST00000394253 PLAG1Q6DJT9 500 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 NUP43Q8NFH3 380 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 DMBX1Q8NFW5 382 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 TRIB1Q96RU8 372 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 GPR22Q99680 433 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 SOX7Q9BT81 388 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 F5P12259 2224 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 KCNJ8Q15842 424 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 CNTN4Q8IWV2 1026 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 CPNE4Q96A23 557 aaPredicted RBP12.69□□□□□ -0.38
USP49-203ENST00000394253 ZNF317Q96PQ6 595 aaPredicted RBP12.69□□□□□ -0.38
USP49-203ENST00000394253 SLC29A1Q99808 456 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 METTL17Q9H7H0 456 aaPredicted RBP12.69□□□□□ -0.38
USP49-203ENST00000394253 ASH2LQ9UBL3 628 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 SULT1C4O75897 302 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 CAPNS1P04632 268 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 ZNF44P15621 663 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 ZNF620Q6ZNG0 422 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 TMPRSS11FQ6ZWK6 438 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 GLB1L2Q8IW92 636 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 MOCOSQ96EN8 888 aa12.69□□□□□ -0.38
USP49-203ENST00000394253 UGDHO60701 494 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 MAT2AP31153 395 aaKnown RBP12.68□□□□□ -0.38
USP49-203ENST00000394253 CEBPEQ15744 281 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 VWA1Q6PCB0 445 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 OR5P2Q8WZ92 322 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 ZNF623O75123 536 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 MPIG6BO95866 241 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms