RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SMIM10L1P0DMW3 83 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 SNRPD2P62316 118 aaKnown RBP17.47■□□□□ 0.39
CBX1-202ENST00000393408 MRPL28Q13084 256 aaKnown RBP17.47■□□□□ 0.39
CBX1-202ENST00000393408 ENPP2Q13822 863 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 EXOSC6Q5RKV6 272 aaKnown RBP17.47■□□□□ 0.39
CBX1-202ENST00000393408 FHL5Q5TD97 284 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 TANGO2Q6ICL3 276 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 RPL13AP3Q6NVV1 102 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 USP53Q70EK8 1073 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 TPRA1Q86W33 373 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 GPR135Q8IZ08 494 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 DNAJC5GQ8N7S2 189 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 OR13C2Q8NGS9 318 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 ABHD4Q8TB40 342 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 ZCCHC10Q8TBK6 192 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 SNAPC3Q92966 411 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 SMIM10Q96HG1 83 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 SERINC2Q96SA4 455 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 IFT27Q9BW83 186 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 SLC17A9Q9BYT1 436 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 ABCG5Q9H222 651 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 FGF22Q9HCT0 170 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 C19orf53Q9UNZ5 99 aaPredicted RBP17.47■□□□□ 0.39
CBX1-202ENST00000393408 STX11O75558 287 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 EML2O95834 649 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 CPMP14384 443 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 NID1P14543 1247 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 IL9P15248 144 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 AHCYP23526 432 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 ACSL1P33121 698 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 BTCP35070 178 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 CAMK2BQ13554 666 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 DEFB134Q4QY38 66 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 DCST2Q5T1A1 773 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 FBXO42Q6P3S6 717 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 LYPD8Q6UX82 237 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 TMPRSS11FQ6ZWK6 438 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 CEACAM19Q7Z692 300 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 GPALPP1Q8IXQ4 340 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 SCARF2Q96GP6 870 aaPredicted RBP17.47■□□□□ 0.39
CBX1-202ENST00000393408 TMEM74BQ9NUR3 256 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 FBXO34Q9NWN3 711 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 TBC1D29Q9UFV1 150 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 SCN2AQ99250 2005 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 A0A0A6YYJ9 748 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 A0A1B0GVC2 190 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 CDHR4A6H8M9 788 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 A6NIN4 97 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 TNFRSF10AO00220 468 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 PEX12O00623 359 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 P2RX6O15547 441 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 SC5DO75845 299 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 MRPL3P09001 348 aaKnown RBP17.46■□□□□ 0.39
CBX1-202ENST00000393408 SLC35G6P0C7Q6 338 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 NDUFS1P28331 727 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 RPS7P62081 194 aaKnown RBP17.46■□□□□ 0.39
CBX1-202ENST00000393408 SLC3A1Q07837 685 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 CREB3L2Q70SY1 520 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 PXKQ7Z7A4 578 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 C17orf47Q8NEP4 570 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 DOK4Q8TEW6 326 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 TM4SF19Q96DZ7 209 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 ABHD1Q96SE0 405 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 OR51V1Q9H2C8 321 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 ADGRL4Q9HBW9 690 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 OBP2AQ9NY56 170 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 SIGLEC7Q9Y286 467 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 CACNG2Q9Y698 323 aa17.46■□□□□ 0.39
CBX1-202ENST00000393408 NPIPA5A0A0B4J1W7 369 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 NPIPA7E9PJI5 369 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 EEF1E1O43324 174 aaKnown RBP17.46■□□□□ 0.38
CBX1-202ENST00000393408 SBK2P0C263 348 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 NPIPA8P0DM63 369 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 NOS3P29474 1203 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 ZNF85Q03923 595 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 SUZ12Q15022 739 aaKnown RBP17.46■□□□□ 0.38
CBX1-202ENST00000393408 BPIFA2Q96DR5 249 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 C4orf36Q96KX1 117 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 IRF2BPLQ9H1B7 796 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 ADAP2Q9NPF8 381 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 DAPP1Q9UN19 280 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 NCKAP1Q9Y2A7 1128 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 HSPB11Q9Y547 144 aa17.46■□□□□ 0.38
CBX1-202ENST00000393408 SLC9B1P1A6NJY1 282 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 C5orf67F2Z3F1 127 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 FMO6PO60774 539 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 LAMP2P13473 410 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 SLC2A5P22732 501 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 SLC16A1P53985 500 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 TAS2R43P59537 309 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 ID2Q02363 134 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 FCRLBQ6BAA4 426 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 ZNF767PQ75MW2 155 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 GET4Q7L5D6 327 aaPredicted RBP17.45■□□□□ 0.38
CBX1-202ENST00000393408 TRMT10AQ8TBZ6 339 aaKnown RBP17.45■□□□□ 0.38
CBX1-202ENST00000393408 PGLYRP3Q96LB9 341 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 HYLS1Q96M11 299 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.45■□□□□ 0.38
CBX1-202ENST00000393408 SATB2Q9UPW6 733 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 TMEM5Q9Y2B1 443 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms