RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ITIH1P19827 911 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 ACAA2P42765 397 aaKnown RBP13.78□□□□□ -0.2
MKS1-202ENST00000393119 NR0B1P51843 470 aaKnown RBP13.78□□□□□ -0.2
MKS1-202ENST00000393119 SQSTM1Q13501 440 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 GINS1Q14691 196 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 SPCS2Q15005 226 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 CBLN3Q6UW01 205 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 PTCHD4Q6ZW05 846 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 CADM2Q8N3J6 435 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 TCEANCQ8N8B7 351 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 RHBDD1Q8TEB9 315 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 DPH1Q9BZG8 443 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 DUSP21Q9H596 190 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 CACYBPQ9HB71 228 aaKnown RBP13.78□□□□□ -0.2
MKS1-202ENST00000393119 DAPK2Q9UIK4 370 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 DMXL1Q9Y485 3027 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 KIF26BQ2KJY2 2108 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 NPIPB9F8W1W9 429 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 ENTPD6O75354 484 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 LCKP06239 509 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 NGFRP08138 427 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 STSP08842 583 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 MAKP20794 623 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 DRD5P21918 477 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 S100A1P23297 94 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 SMIM11AP58511 58 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 ACY1Q03154 408 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 ILKQ13418 452 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 MFSD4AQ8N468 514 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 NAT6Q93015 286 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 ADIPOR1Q96A54 375 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 MMACHCQ9Y4U1 282 aa13.78□□□□□ -0.2
MKS1-202ENST00000393119 IDSB3KWA1 339 aa13.77□□□□□ -0.21
MKS1-202ENST00000393119 LRRN3E7EW58 273 aa13.77□□□□□ -0.21
MKS1-202ENST00000393119 MASP2O00187 686 aa13.77□□□□□ -0.21
MKS1-202ENST00000393119 APOL3O95236 402 aa13.77□□□□□ -0.21
MKS1-202ENST00000393119 ANKRD34CP0C6C1 535 aa13.77□□□□□ -0.21
MKS1-202ENST00000393119 CCDC159P0C7I6 412 aa13.77□□□□□ -0.21
MKS1-202ENST00000393119 MSL3P1P0C860 447 aa13.77□□□□□ -0.21
MKS1-202ENST00000393119 GP2P55259 537 aaKnown RBP13.77□□□□□ -0.21
MKS1-202ENST00000393119 FAR1Q8WVX9 515 aa13.77□□□□□ -0.21
MKS1-202ENST00000393119 ENAMQ9NRM1 1142 aa13.77□□□□□ -0.21
MKS1-202ENST00000393119 BLACEA4D250 179 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 TOX3O15405 576 aaPredicted RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 SLC2A10O95528 541 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 SYPP08247 313 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 ELAVL1Q15717 326 aaKnown RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 SLC30A6Q6NXT4 461 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 RRM2BQ7LG56 351 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 PPP1R3BQ86XI6 285 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 OR5M3Q8NGP4 307 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 ACOT11Q8WXI4 607 aaPredicted RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 ZNF566Q969W8 418 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 WDR12Q9GZL7 423 aaKnown RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 MKKSQ9NPJ1 570 aaPredicted RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 MEPEQ9NQ76 525 aaPredicted RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 ZNF223Q9UK11 482 aaPredicted RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 HSPE1-MOB4S4R3N1 261 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 CACNA1HO95180 2353 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 C2orf92A0A1B0GVN3 265 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 A0A1B0GWA3 101 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 NTN3O00634 580 aaPredicted RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 TLX2O43763 284 aaPredicted RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 ATP12AP54707 1039 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 SELENBP1Q13228 472 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 EBPQ15125 230 aaKnown RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 CTF1Q16619 201 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 ZNF385CQ66K41 422 aaPredicted RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 KIRREL2Q6UWL6 708 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 RANBP3LQ86VV4 465 aaPredicted RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 ANKRD13BQ86YJ7 626 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 POGLUT1Q8NBL1 392 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 B3GNT7Q8NFL0 401 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 MUL1Q969V5 352 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 TPK1Q9H3S4 243 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 TRIM45Q9H8W5 580 aaPredicted RBP13.76□□□□□ -0.21
MKS1-202ENST00000393119 ENPP5Q9UJA9 477 aa13.76□□□□□ -0.21
MKS1-202ENST00000393119 TRAPPC13A5PLN9 417 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 C2orf72A6NCS6 295 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 KHNYNO15037 678 aaKnown RBP13.75□□□□□ -0.21
MKS1-202ENST00000393119 ICOSLGO75144 302 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 OR5F1O95221 314 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 AK1P00568 194 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 RORAP35398 523 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 GIPRP48546 466 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 FXYD6P3P58550 94 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 EIPR1Q53HC9 387 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 MBOAT2Q6ZWT7 520 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 TMCO5AQ8N6Q1 288 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 OR4Q3Q8NH05 313 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 COPS4Q9BT78 406 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 HMG20AQ9NP66 347 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 SCN3BQ9NY72 215 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 PSORS1C1Q9UIG5 152 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 CARD8Q9Y2G2 431 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 REM1O75628 298 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 CSTAP01040 98 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 HEXBP07686 556 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 CSTF2P33240 577 aaKnown RBP eCLIP13.75□□□□□ -0.21
MKS1-202ENST00000393119 GABARAPL2P60520 117 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms