RNA–Protein interactions for RNA: ENST00000390489.1

TRAJ48-201, Transcript of T cell receptor alpha joining 48, humanhuman

APPRIS P1 BASIC

Gene TRAJ48, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ48-201ENST00000390489 HERVK_113P63132 956 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 ERVK-8P63133 956 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 ASIC1P78348 528 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 TSPY1Q01534 308 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 NME3Q13232 169 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 UBE2V2Q15819 145 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 NRF1Q16656 503 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 FAM120AOSQ5T036 256 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 NCR3LG1Q68D85 454 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 OR8G2PQ6IF36 304 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 GLRX5Q86SX6 157 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 NRMQ8IXM6 262 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 CCDC36Q8IYA8 594 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 MTURNQ8N3F0 131 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 NAT8LQ8N9F0 302 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 NPBQ8NG41 125 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 OR8H1Q8NGG4 311 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 ART4Q93070 314 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 TMEM45BQ96B21 275 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 RPUSD4Q96CM3 377 aaKnown RBP0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 CCDC51Q96ER9 411 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 OR10C1Q96KK4 312 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 DEFB118Q96PH6 123 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 KCNA7Q96RP8 456 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 ERVK-6Q9BXR3 956 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 AP1M1Q9BXS5 423 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 OR11A1Q9GZK7 315 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 NFKBIL1Q9UBC1 381 aaPredicted RBP0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 GHRLQ9UBU3 117 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 OR12D3Q9UGF7 316 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 MAD2L2Q9UI95 211 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 EIF3LQ9Y262 564 aaKnown RBP0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 MAD1L1Q9Y6D9 718 aa0.67□□□□□ -2.3
TRAJ48-201ENST00000390489 NUP214P35658 2090 aaPredicted RBP0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 RRP8O43159 456 aaKnown RBP0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 HCRTR1O43613 425 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 STX6O43752 255 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 SS18L1O75177 396 aaPredicted RBP0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 ECI2O75521 394 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 MOSP00540 346 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 GIPP09681 153 aaPredicted RBP0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 POLR2MP0CAP2 368 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 H2AFXP16104 143 aaPredicted RBP0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 COL8A2P25067 703 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 EPHX2P34913 555 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 KIR3DL2P43630 455 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 LIM2P55344 173 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 CHRNB3Q05901 458 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 KLHL30Q0D2K2 578 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 ATXN7L3Q14CW9 347 aaPredicted RBP0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 MEP1BQ16820 701 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 C16orf54Q6UWD8 224 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 GBP6Q6ZN66 633 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 Q6ZR03 302 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 P4HA3Q7Z4N8 544 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 PRSS42Q7Z5A4 293 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 GOLGA7Q7Z5G4 137 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 Q8N976 141 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 MCHR1Q99705 422 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 FAM213AQ9BRX8 229 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 NDUFAF3Q9BU61 184 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 AKIRIN1Q9H9L7 192 aaPredicted RBP0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 SAMSN1Q9NSI8 373 aaKnown RBP0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 ZCCHC3Q9NUD5 404 aaKnown RBP0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 GNPTGQ9UJJ9 305 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 APPL1Q9UKG1 709 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 PLA2G4CQ9UP65 541 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 ZNF407Q9C0G0 2248 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 CARMIL3Q8ND23 1372 aa0.66□□□□□ -2.3
TRAJ48-201ENST00000390489 IGSF9BQ9UPX0 1349 aa0.65□□□□□ -2.3
TRAJ48-201ENST00000390489 PIKFYVEQ9Y2I7 2098 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 SHANK1Q9Y566 2161 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 IGLV3-12A0A075B6K2 115 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 ZNF705EA8MWA4 302 aaPredicted RBP0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 J3QKU1 62 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 ATP6V1G1O75348 118 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 AKAP3O75969 853 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 SYNGR4O95473 234 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 LALBAP00709 142 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 ICAM2P13598 275 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 PTGDSP41222 190 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 TAS2R19P59542 299 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 MRPS6P82932 125 aaKnown RBP0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 SRYQ05066 204 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 ST3GAL3Q11203 375 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 GNMTQ14749 295 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 PSG5Q15238 335 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 IRF4Q15306 451 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 SPIN3Q5JUX0 258 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 PRAMEF8Q5VWM4 474 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 GALNT17Q6IS24 598 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 ZNF562Q6V9R5 426 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 GDPD3Q7L5L3 318 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 LRRC70Q7Z2Q7 622 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 VPS36Q86VN1 386 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 AMZ2Q86W34 360 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 ZNF461Q8TAF7 563 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 COL21A1Q96P44 957 aa0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 AKAP7Q9P0M2 348 aaPredicted RBP0.65□□□□□ -2.31
TRAJ48-201ENST00000390489 SAMHD1Q9Y3Z3 626 aaKnown RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms