RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 KIFC1Q9BW19 673 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 POLR1EQ9GZS1 481 aaKnown RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 ANKZF1Q9H8Y5 726 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 C12orf10Q9HB07 376 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 MEPEQ9NQ76 525 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 EXOC1Q9NV70 894 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 CWC25Q9NXE8 425 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 CWC15Q9P013 229 aaKnown RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 SPASTQ9UBP0 616 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 GMEB2Q9UKD1 530 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 MMP17Q9ULZ9 603 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 CHKBQ9Y259 395 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 GTF3C3Q9Y5Q9 886 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 CICQ96RK0 1608 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 PTPN23Q9H3S7 1636 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 MAP3K15Q6ZN16 1313 aa-1.45□□□□□ -2.64
RNU6-540P-201ENST00000384622 SBF1O95248 1867 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TMEM131Q92545 1883 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ADGRB1O14514 1584 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 NHSL1Q5SYE7 1610 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TRAV8-4A0A0B4J246 113 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 C9orf92A6NGG3 77 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 H3BQ06 376 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 O00370 1275 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 IPO5O00410 1097 aaKnown RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 PEX12O00623 359 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 STX16O14662 325 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 PIN1P1O15428 100 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 GYG2O15488 501 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 NDUFS4O43181 175 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 DUX1O43812 170 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 CCDC22O60826 627 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TBL1XO60907 577 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ENTPD3O75355 529 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 LY6HO94772 140 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 IGF2P01344 180 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 IGLV3-25P01717 112 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 P01737 135 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 PGK2P07205 417 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 CAPN1P07384 714 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 CECR9P0C854 216 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 DBTP11182 482 aaKnown RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 HSD17B1P14061 328 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ETS1P14921 441 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TCP1P17987 556 aaKnown RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 SPRR1AP35321 89 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 SYKP43405 635 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TRAPPC10P48553 1259 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 PNLIPRP1P54315 467 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 RPL8P62917 257 aaKnown RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 HLA-DRB3P79483 266 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 XIAPP98170 497 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF85Q03923 595 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 UBXN1Q04323 297 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 FOLH1Q04609 750 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 LMOD3Q0VAK6 560 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 GK3PQ14409 553 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF266Q14584 549 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 UBE2SQ16763 222 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ALG11Q2TAA5 492 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 LRIT3Q3SXY7 679 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 RNASE10Q5GAN6 216 aaKnown RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 SAMD4BQ5PRF9 694 aaKnown RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TAF3Q5VWG9 929 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ACAD10Q6JQN1 1059 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 JMJD6Q6NYC1 403 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 WDR74Q6RFH5 385 aaPredicted RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 CD164L2Q6UWJ8 174 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 STOX1Q6ZVD7 989 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TRPM8Q7Z2W7 1104 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ACOT1Q86TX2 421 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF100Q8IYN0 542 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 CLECL1Q8IZS7 167 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 RDH10Q8IZV5 341 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 LINC00518Q8N0U6 118 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 RPRMLQ8N4K4 120 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 SAMD12Q8N8I0 201 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 RASGEF1AQ8N9B8 481 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TNIP2Q8NFZ5 429 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 OR2AJ1Q8NGZ0 328 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 LYPD6BQ8NI32 183 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 MUC7Q8TAX7 377 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 CMTM2Q8TAZ6 248 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 URGCPQ8TCY9 931 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 RUFY2Q8WXA3 655 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 BRI3BPQ8WY22 251 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TMEM158Q8WZ71 300 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 MRPS27Q92552 414 aaKnown RBP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TBRG4Q969Z0 631 aaKnown RBP eCLIP-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 HOOK2Q96ED9 719 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 GPATCH3Q96I76 525 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 CCDC114Q96M63 670 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 NEK1Q96PY6 1258 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TSPAN32Q96QS1 320 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 GPER1Q99527 375 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TBX5Q99593 518 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 PKMYT1Q99640 499 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 TTYH2Q9BSA4 534 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 CNPY3Q9BT09 278 aa-1.46□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF471Q9BX82 626 aaPredicted RBP-1.46□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms