RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ZCCHC10Q8TBK6 192 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 ELF4Q99607 663 aaPredicted RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 TKTL2Q9H0I9 626 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 CDT1Q9H211 546 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 SARS2Q9NP81 518 aaKnown RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 SEMA4BQ9NPR2 832 aaPredicted RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 UQCC1Q9NVA1 299 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 TRPM7Q96QT4 1865 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 ZSWIM8A7E2V4 1837 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 E9PQ18 207 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 FAM72CH0Y354 149 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 SULT2B1O00204 365 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 PRAF2O60831 178 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 PIAS2O75928 621 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 IFNA17P01571 189 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 ZNF286BP0CG31 522 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 IL1RNP18510 177 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 EDNRBP24530 442 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 ACKR3P25106 362 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 MAGEB1P43366 347 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 PITPNBP48739 271 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 LUMP51884 338 aaPredicted RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 ZNF140P52738 457 aaPredicted RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 CXADRP78310 365 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 SNTB2Q13425 540 aaKnown RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 RNF151Q2KHN1 245 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 PLEKHN1Q494U1 663 aaPredicted RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 SLC36A2Q495M3 483 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 FAM72AQ5TYM5 149 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 FAM72DQ6L9T8 149 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 SMIM15Q7Z3B0 74 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 FAM72BQ86X60 149 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 LCORQ96JN0 433 aaPredicted RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 NOL4LQ96MY1 436 aaPredicted RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 PCYT2Q99447 389 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 MRI1Q9BV20 369 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 BCO2Q9BYV7 579 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 ACTL8Q9H568 366 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 SFXN1Q9H9B4 322 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 MEPEQ9NQ76 525 aaPredicted RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 NEUROG3Q9Y4Z2 214 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 PIKFYVEQ9Y2I7 2098 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 TRAPPC13A5PLN9 417 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 CBY3A6NI87 242 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 NUDT19A8MXV4 375 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 M0R143 59 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 PAX1P15863 534 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 GJA4P35212 333 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 SERPINF1P36955 418 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 CDKN1BP46527 198 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 NDUFV1P49821 464 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 IL10RBQ08334 325 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 ACTBL2Q562R1 376 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 ZRANB3Q5FWF4 1079 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 TMEM201Q5SNT2 666 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 C1orf94Q6P1W5 598 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 PGBD2Q6P3X8 592 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 NAXEQ8NCW5 288 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 DBF4BQ8NFT6 615 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 OR1N1Q8NGS0 311 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 GPR150Q8NGU9 434 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 OIT3Q8WWZ8 545 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 ARL11Q969Q4 196 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 SCLYQ96I15 445 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 THOC3Q96J01 351 aaKnown RBP8.74□□□□□ -1.01
PTPRA-204ENST00000380393 SPATA33Q96N06 139 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 IL4I1Q96RQ9 567 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 TEAD3Q99594 435 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 TMEM134Q9H6X4 195 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 CERS4Q9HA82 394 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 PCDHB8Q9UN66 801 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 NUP214P35658 2090 aaPredicted RBP8.74□□□□□ -1.01
PTPRA-204ENST00000380393 BLOC1S5-TXNDC5H3BN57 136 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 RNF13O43567 381 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 MGMTP16455 207 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 PCGF2P35227 344 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 CHRNA4P43681 627 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 TDGF1P3P51864 188 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 FAM189BP81408 668 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 SLC7A9P82251 487 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 ITKQ08881 620 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 TMEM132DQ14C87 1099 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 Q5PR19 223 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 DNLZQ5SXM8 178 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 IDNKQ5T6J7 187 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 OVOS1Q6IE37 1185 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 IL20RBQ6UXL0 311 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 PIM3Q86V86 326 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 CNTN4Q8IWV2 1026 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 ESAMQ96AP7 390 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 ZNF514Q96K75 400 aaPredicted RBP8.74□□□□□ -1.01
PTPRA-204ENST00000380393 FSD1LQ9BXM9 530 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 GPR15P49685 360 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 ISXQ2M1V0 245 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 PLK5Q496M5 336 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 CERS6Q6ZMG9 384 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 SLC5A8Q8N695 610 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 TRIM2Q9C040 744 aa8.74□□□□□ -1.01
PTPRA-204ENST00000380393 TMEM185BQ9H7F4 350 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms