RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ART5Q96L15 291 aa18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 LRR1Q96L50 414 aa18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 GAL3ST4Q96RP7 486 aa18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 GFM1Q96RP9 751 aaKnown RBP18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 CDCA4Q9BXL8 241 aa18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 SIDT1Q9NXL6 827 aaKnown RBP18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 IL20RAQ9UHF4 553 aa18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 RPL36Q9Y3U8 105 aaKnown RBP18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 IGLV3-12A0A075B6K2 115 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 FUT1P19526 365 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 NFATC3Q12968 1075 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 CTF1Q16619 201 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 SYT14P1Q58G82 188 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 MEDAGQ5VYS4 303 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 C9orf40Q8IXQ3 194 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 ZBTB44Q8NCP5 570 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 OR4Q3Q8NH05 313 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 NRSN2Q9GZP1 204 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 APMAPQ9HDC9 416 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 UBQLN4Q9NRR5 601 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 TAS2R16Q9NYV7 291 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 MED31Q9Y3C7 131 aa18.27■□□□□ 0.51
PDLIM5-205ENST00000380180 RALGAPA1Q6GYQ0 2036 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 PCNX3Q9H6A9 2034 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 UNC119BA6NIH7 251 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 PTHP01270 115 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 DUSP3P51452 185 aaPredicted RBP18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 ROR2Q01974 943 aaKnown RBP18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 EBPQ15125 230 aaKnown RBP18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 ALG10BQ5I7T1 473 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 CADM2Q8N3J6 435 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 OR1N1Q8NGS0 311 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 TMEM163Q8TC26 289 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 BPIFA2Q96DR5 249 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 HS6ST2Q96MM7 605 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 ZNF582Q96NG8 517 aaPredicted RBP18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 SLC38A2Q96QD8 506 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 HOXD1Q9GZZ0 328 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 MEPEQ9NQ76 525 aaPredicted RBP18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 OCIAD1Q9NX40 245 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 COPS7AQ9UBW8 275 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 GPR52Q9Y2T5 361 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 CDH10Q9Y6N8 788 aa18.26■□□□□ 0.51
PDLIM5-205ENST00000380180 KIF26BQ2KJY2 2108 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 CDC14CA4D256 554 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 M0R082 166 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 RFPL3O75679 317 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 CH25HO95992 272 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 SP9P0CG40 484 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 ADORA3P0DMS8 318 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 DBTP11182 482 aaKnown RBP18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 DCAF7P61962 342 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 ZNF91Q05481 1191 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 PPP1R3BQ86XI6 285 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 SLITRK4Q8IW52 837 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 PRR22Q8IZ63 422 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 CDK20Q8IZL9 346 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 CACTIN-AS1Q8N1I8 211 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 CLDN22Q8N7P3 220 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 SAMD8Q96LT4 415 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 SLC35A3Q9Y2D2 325 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 EFCAB7A8K855 629 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 HPGDP15428 266 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 ZNF182P17025 639 aaPredicted RBP18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 MLLT10P55197 1068 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 DCDP81605 110 aaKnown RBP18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 AQP6Q13520 282 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 HLA-DQA1Q5Y7H0 255 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 ULK3Q6PHR2 472 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 KIRREL2Q6UWL6 708 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 TMPRSS11FQ6ZWK6 438 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 AMER2Q8N7J2 671 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 GATSQ8NAP1 163 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 ZNF527Q8NB42 609 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 ADOQ96SZ5 270 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 ZNF426Q9BUY5 554 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 SLC24A3Q9HC58 644 aa18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 MRTO4Q9UKD2 239 aaKnown RBP18.25■□□□□ 0.51
PDLIM5-205ENST00000380180 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 CNOT3O75175 753 aaKnown RBP18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 GABARAPO95166 117 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 UTS2O95399 124 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 LIPAP38571 399 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 NR0B1P51843 470 aaKnown RBP18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 CTBP2P56545 445 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 FXYD6P3P58550 94 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 NCF4Q15080 339 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 TIGD6Q17RP2 521 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 FNDC7Q5VTL7 733 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 DESI1Q6ICB0 168 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 APOOLQ6UXV4 268 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 LINC00114Q6XXX2 140 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 P2RY8Q86VZ1 359 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 C9orf43Q8TAL5 461 aaPredicted RBP18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 ATOH1Q92858 354 aaPredicted RBP18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 CRELD1Q96HD1 420 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 PRRG3Q9BZD7 231 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 WWTR1Q9GZV5 400 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 OR52D1Q9H346 318 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 HHATLQ9HCP6 504 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms