RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 ATP13A2Q9NQ11 1180 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 SOHLH2Q9NX45 425 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 NLGN3Q9NZ94 848 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 DIMT1Q9UNQ2 313 aaKnown RBP13.75□□□□□ -0.21
PRNP-201ENST00000379440 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.75□□□□□ -0.21
PRNP-201ENST00000379440 PRODHO43272 600 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 RAB36O95755 333 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 IL9P15248 144 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 MLLT3P42568 568 aaPredicted RBP13.75□□□□□ -0.21
PRNP-201ENST00000379440 BLVRAP53004 296 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 ZNF267Q14586 743 aaPredicted RBP13.75□□□□□ -0.21
PRNP-201ENST00000379440 NNATQ16517 81 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 PDZK1Q5T2W1 519 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 ALKBH2Q6NS38 261 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 PROKR2Q8NFJ6 384 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 CNOT9Q92600 299 aaKnown RBP13.75□□□□□ -0.21
PRNP-201ENST00000379440 OSTF1Q92882 214 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 PRTFDC1Q9NRG1 225 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 CLDN16Q9Y5I7 305 aa13.75□□□□□ -0.21
PRNP-201ENST00000379440 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 MYL12BO14950 172 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 SURF4O15260 269 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 HRO43593 1189 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 CTNSO60931 367 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 ADAM11O75078 769 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 LYPD3O95274 346 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 MAKP20794 623 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 DBPQ10586 325 aaPredicted RBP13.74□□□□□ -0.21
PRNP-201ENST00000379440 KCNAB1Q14722 419 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 PERM1Q5SV97 790 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 CLVS2Q5SYC1 327 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 COL13A1Q5TAT6 717 aaPredicted RBP13.74□□□□□ -0.21
PRNP-201ENST00000379440 HSDL2Q6YN16 418 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 KBTBD8Q8NFY9 601 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 SPACA7Q96KW9 195 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 EXOSC4Q9NPD3 245 aaKnown RBP13.74□□□□□ -0.21
PRNP-201ENST00000379440 SYNDIG1LA6NDD5 238 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 LILRA5A6NI73 299 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 AK1P00568 194 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 LRIT3Q3SXY7 679 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 OR2G6Q5TZ20 316 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 FAM205BPQ63HN1 556 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 ASCC1Q8N9N2 400 aaKnown RBP13.74□□□□□ -0.21
PRNP-201ENST00000379440 CADM4Q8NFZ8 388 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 GRHL3Q8TE85 626 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 TMEM239Q8WW34 195 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 HOXB13Q92826 284 aaPredicted RBP13.74□□□□□ -0.21
PRNP-201ENST00000379440 DACT3Q96B18 629 aaPredicted RBP13.74□□□□□ -0.21
PRNP-201ENST00000379440 TRMT61AQ96FX7 289 aaKnown RBP13.74□□□□□ -0.21
PRNP-201ENST00000379440 CNPPD1Q9BV87 410 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.74□□□□□ -0.21
PRNP-201ENST00000379440 ENKD1Q9H0I2 346 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 MMP27Q9H306 513 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 ZNF223Q9UK11 482 aaPredicted RBP13.74□□□□□ -0.21
PRNP-201ENST00000379440 FBXL21Q9UKT6 434 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 MRPS17Q9Y2R5 130 aaKnown RBP13.74□□□□□ -0.21
PRNP-201ENST00000379440 CSNK1G3Q9Y6M4 447 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 MAU2Q9Y6X3 613 aa13.74□□□□□ -0.21
PRNP-201ENST00000379440 PRKNO60260 465 aaPredicted RBP13.73□□□□□ -0.21
PRNP-201ENST00000379440 NSA2O95478 260 aaKnown RBP13.73□□□□□ -0.21
PRNP-201ENST00000379440 ZGLP1P0C6A0 271 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 IFI30P13284 250 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 MTNR1AP48039 350 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 FNTBP49356 437 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 PGDP52209 483 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 PGGHGQ32M88 737 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 LIPKQ5VXJ0 399 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 RNLSQ5VYX0 342 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 PTCRAQ6ISU1 281 aaPredicted RBP13.73□□□□□ -0.21
PRNP-201ENST00000379440 C17orf82Q86X59 251 aaPredicted RBP13.73□□□□□ -0.21
PRNP-201ENST00000379440 AMER2Q8N7J2 671 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 BBS1Q8NFJ9 593 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 TP53INP1Q96A56 240 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 PTCHD1Q96NR3 888 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 PLCL2Q9UPR0 1127 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 SPAG17Q6Q759 2223 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 PNMA8CA0A1B0GUJ8 204 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 KDM4EB2RXH2 506 aaPredicted RBP13.73□□□□□ -0.21
PRNP-201ENST00000379440 BCKDHBP21953 392 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 TGM1P22735 817 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 FXYD6P3P58550 94 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 KLHL22Q53GT1 634 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 SHEQ5VZ18 495 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 NPSR1Q6W5P4 371 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 ZNF595Q8IYB9 648 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 VSTM2LQ96N03 204 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 DGAT2Q96PD7 388 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 LMF2Q9BU23 707 aaKnown RBP13.73□□□□□ -0.21
PRNP-201ENST00000379440 OR2B2Q9GZK3 357 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 UCK1Q9HA47 277 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 MRPS33Q9Y291 106 aaKnown RBP13.73□□□□□ -0.21
PRNP-201ENST00000379440 CDH10Q9Y6N8 788 aa13.73□□□□□ -0.21
PRNP-201ENST00000379440 FAM183AA6NL82 134 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 LRRTM2O43300 516 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 IFI6P09912 130 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 DRD5P21918 477 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 CD79BP40259 229 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 GCGRP47871 477 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 CDH11P55287 796 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 NXPH1P58417 271 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms