RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 MIPOL1Q8TD10 442 aa17.01■□□□□ 0.31
TMEM88B-201ENST00000378821 SMPDL3BQ92485 455 aa17.01■□□□□ 0.31
TMEM88B-201ENST00000378821 FIG4Q92562 907 aa17.01■□□□□ 0.31
TMEM88B-201ENST00000378821 VPS33AQ96AX1 596 aa17.01■□□□□ 0.31
TMEM88B-201ENST00000378821 ALPK1Q96QP1 1244 aa17.01■□□□□ 0.31
TMEM88B-201ENST00000378821 OR51I1Q9H343 314 aa17.01■□□□□ 0.31
TMEM88B-201ENST00000378821 SLC6A13Q9NSD5 602 aa17.01■□□□□ 0.31
TMEM88B-201ENST00000378821 FGFR1OP2Q9NVK5 253 aa17.01■□□□□ 0.31
TMEM88B-201ENST00000378821 ABCA4P78363 2273 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 NPIPA5A0A0B4J1W7 369 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 A0A1W2PQD3 144 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 SH3D21A4FU49 640 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 NPIPA7E9PJI5 369 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 HRGP04196 525 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 NPIPA8P0DM63 369 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 ZNF17P17021 662 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 DNASE1P24855 282 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 PSMA4P25789 261 aaKnown RBP17■□□□□ 0.31
TMEM88B-201ENST00000378821 ATP4BP51164 291 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 LRRC74AQ0VAA2 488 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 CGB2Q6NT52 195 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 MSANTD1Q6ZTZ1 278 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 P4HA3Q7Z4N8 544 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 BTLAQ7Z6A9 289 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 FUNDC1Q8IVP5 155 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 UBQLNLQ8IYU4 475 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 OR5M1Q8NGP8 315 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 SIKE1Q9BRV8 207 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 CCDC134Q9H6E4 229 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 UBQLN4Q9NRR5 601 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 TESMINQ9Y4I5 508 aa17■□□□□ 0.31
TMEM88B-201ENST00000378821 A0A0G2JND7 137 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 RFXANKO14593 260 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 NDUFB5O43674 189 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 SOX30O94993 753 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 ATE1O95260 518 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 CD8BP10966 210 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 ATP6V1C1P21283 382 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 CPA2P48052 419 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 FGFBP1Q14512 234 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 SQLEQ14534 574 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 VWA1Q6PCB0 445 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 ZNF474Q6S9Z5 364 aaPredicted RBP16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 ZNF621Q6ZSS3 439 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 RNF130Q86XS8 419 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 TGIF2LYQ8IUE0 185 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 GTPBP8Q8N3Z3 284 aaPredicted RBP16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 TRIML2Q8N7C3 387 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 GATSQ8NAP1 163 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 CHDHQ8NE62 594 aaPredicted RBP16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 PINK1Q9BXM7 581 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 ZNF385DQ9H6B1 395 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 ELOVL5Q9NYP7 299 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 PLEKHA6Q9Y2H5 1048 aa16.99■□□□□ 0.31
TMEM88B-201ENST00000378821 NF1P21359 2839 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 DUXAA6NLW8 204 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 H3BML4 177 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 NR5A2O00482 541 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 RAF1P04049 648 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 OR12D1P0DN82 309 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 KHKP50053 298 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 FAM27E3Q08E93 113 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 GTDC1Q4AE62 458 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 SLC2A7Q6PXP3 512 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 OLIG3Q7RTU3 272 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 MISPQ8IVT2 679 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 FNDC9Q8TBE3 224 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 RAB8BQ92930 207 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 ZBTB8AQ96BR9 441 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 ZNF845Q96IR2 970 aaPredicted RBP16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 ITCHQ96J02 903 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 ADGRG7Q96K78 797 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 SDF2Q99470 211 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 TMEM120AQ9BXJ8 343 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 RMND5AQ9H871 391 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 CCDC167Q9P0B6 97 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 STOML1Q9UBI4 398 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 NDRG3Q9UGV2 375 aa16.98■□□□□ 0.31
TMEM88B-201ENST00000378821 A0A1W2PPR1 153 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 NPIPB9F8W1W9 429 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 SCDO00767 359 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 ADAMDEC1O15204 470 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 AK1P00568 194 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 VIMP08670 466 aaKnown RBP16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 CD79BP40259 229 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 MDH1P40925 334 aaKnown RBP16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 RNF144AP50876 292 aaPredicted RBP16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 RPS3AP61247 264 aaKnown RBP16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 FUT5Q11128 374 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 PON3Q15166 354 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 CD226Q15762 336 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 CTU2Q2VPK5 515 aaKnown RBP16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 PLPPR5Q32ZL2 321 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 ARHGAP11BQ3KRB8 267 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 AGKQ53H12 422 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 C6orf10Q5SRN2 563 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.97■□□□□ 0.311e-6■■■■■ 46.2
TMEM88B-201ENST00000378821 HEPHL1Q6MZM0 1159 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 BLOC1S3Q6QNY0 202 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 C16orf62Q7Z3J2 963 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms