RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 FUT7Q11130 342 aa12.5□□□□□ -0.41
PRPF18-202ENST00000378572 LASP1Q14847 261 aaKnown RBP12.5□□□□□ -0.41
PRPF18-202ENST00000378572 SF3B4Q15427 424 aaKnown RBP eCLIP12.5□□□□□ -0.41
PRPF18-202ENST00000378572 TRMT12Q53H54 448 aaKnown RBP12.5□□□□□ -0.41
PRPF18-202ENST00000378572 MFSD12Q6NUT3 480 aa12.5□□□□□ -0.41
PRPF18-202ENST00000378572 CDC73Q6P1J9 531 aa12.5□□□□□ -0.41
PRPF18-202ENST00000378572 SZRD1Q7Z422 152 aa12.5□□□□□ -0.41
PRPF18-202ENST00000378572 LACC1Q8IV20 430 aa12.5□□□□□ -0.41
PRPF18-202ENST00000378572 RELL2Q8NC24 303 aaPredicted RBP12.5□□□□□ -0.41
PRPF18-202ENST00000378572 SPPL2AQ8TCT8 520 aa12.5□□□□□ -0.41
PRPF18-202ENST00000378572 HOXB13Q92826 284 aaPredicted RBP12.5□□□□□ -0.41
PRPF18-202ENST00000378572 DUS3LQ96G46 650 aaKnown RBP12.5□□□□□ -0.41
PRPF18-202ENST00000378572 NSMCE2Q96MF7 247 aa12.5□□□□□ -0.41
PRPF18-202ENST00000378572 GIN1Q9NXP7 522 aa12.5□□□□□ -0.41
PRPF18-202ENST00000378572 EDARQ9UNE0 448 aa12.5□□□□□ -0.41
PRPF18-202ENST00000378572 C15orf41Q9Y2V0 281 aa12.5□□□□□ -0.41
PRPF18-202ENST00000378572 ARHGAP21Q5T5U3 1957 aa12.5□□□□□ -0.41
PRPF18-202ENST00000378572 NINQ8N4C6 2090 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 DUXAA6NLW8 204 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 AHRRA9YTQ3 701 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 TRIM3O75382 744 aaPredicted RBP12.49□□□□□ -0.41
PRPF18-202ENST00000378572 CTAG2O75638 210 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 SNX4O95219 450 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 CBX7O95931 251 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 AGR2O95994 175 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 NUDT7P0C024 238 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 UMPSP11172 480 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 CD99P14209 185 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 DNASE1P24855 282 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 PRKAG1P54619 331 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 CRYZQ08257 329 aaKnown RBP12.49□□□□□ -0.41
PRPF18-202ENST00000378572 FLYWCH1Q4VC44 716 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 INTS11Q5TA45 600 aaKnown RBP12.49□□□□□ -0.41
PRPF18-202ENST00000378572 CDRT4Q8N9R6 151 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 NAXEQ8NCW5 288 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 OR7G1Q8NGA0 311 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 RNASE6Q93091 150 aaKnown RBP12.49□□□□□ -0.41
PRPF18-202ENST00000378572 TP53INP1Q96A56 240 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 GNRHR2Q96P88 292 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 OR51I1Q9H343 314 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
PRPF18-202ENST00000378572 PLEKHA6Q9Y2H5 1048 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 PCDHGB3Q9Y5G1 929 aa12.49□□□□□ -0.41
PRPF18-202ENST00000378572 MTORP42345 2549 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 TTC36A6NLP5 189 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 KDM4EB2RXH2 506 aaPredicted RBP12.48□□□□□ -0.41
PRPF18-202ENST00000378572 NCK1P16333 377 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 MAP3K8P41279 467 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 RPS26P62854 115 aaKnown RBP12.48□□□□□ -0.41
PRPF18-202ENST00000378572 CDK6Q00534 326 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 PLCXD2Q0VAA5 305 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 SCARB2Q14108 478 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 EIPR1Q53HC9 387 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 WIPI1Q5MNZ9 446 aaPredicted RBP12.48□□□□□ -0.41
PRPF18-202ENST00000378572 ZFP1Q6P2D0 407 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 TNFAIP8L2Q6P589 184 aaPredicted RBP12.48□□□□□ -0.41
PRPF18-202ENST00000378572 CYP2R1Q6VVX0 501 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 SEM1Q6ZVN7 128 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 CCDC80Q76M96 950 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 SPATA24Q86W54 205 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 ZNF441Q8N8Z8 693 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 HIPK4Q8NE63 616 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 FIG4Q92562 907 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 STMN2Q93045 179 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 STACQ99469 402 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 TIMP4Q99727 224 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 RASSF4Q9H2L5 321 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 KLRF1Q9NZS2 232 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 P2RX2Q9UBL9 471 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 ST6GALNAC2Q9UJ37 374 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 ANKHD1Q8IWZ3 2542 aaKnown RBP12.48□□□□□ -0.41
PRPF18-202ENST00000378572 TCRBV5S2A0A599 114 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 ANKRD33BA6NCL7 494 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 TMEM247A6NEH6 219 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 EPPINO95925 133 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 GPIP06744 558 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 TFPTP0C1Z6 253 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 OR12D1P0DN82 309 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 ABCD3P28288 659 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 AGFG1P52594 562 aaKnown RBP12.48□□□□□ -0.41
PRPF18-202ENST00000378572 GNA13Q14344 377 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 PRAMEF8Q5VWM4 474 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 PRAMEF7Q5VXH5 474 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 OR1J4Q8NGS1 313 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 SLC26A7Q8TE54 656 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 ADAMTS15Q8TE58 950 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 FAM222BQ8WU58 562 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 NINJ1Q92982 152 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 MAL2Q969L2 176 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 C16orf58Q96GQ5 468 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 OR7D2Q96RA2 312 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 LMF2Q9BU23 707 aaKnown RBP12.48□□□□□ -0.41
PRPF18-202ENST00000378572 ANGPTL4Q9BY76 406 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 LIME1Q9H400 295 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 DCLRE1BQ9H816 532 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 ANKRA2Q9H9E1 313 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 DUSP22Q9NRW4 184 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 LIPT1Q9Y234 373 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 ANGPT4Q9Y264 503 aa12.48□□□□□ -0.41
PRPF18-202ENST00000378572 CFL2Q9Y281 166 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms