RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 LYRM1O43325 122 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 B4GALT3O60512 393 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 IGLV3-27P01718 113 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 PRKACBP22694 351 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 CTHP32929 405 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 WNT4P56705 351 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 NLGN4XQ8N0W4 816 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 ZSCAN1Q8NBB4 408 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 DPH1Q9BZG8 443 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 COL5A3P25940 1745 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-201ENST00000378156 PIGBOS1A0A0B4J2F0 54 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 SLCO2B1O94956 709 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 B3GALT4O96024 378 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 FGFBP1Q14512 234 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 CARD17Q5XLA6 110 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 WDR53Q7Z5U6 358 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-201ENST00000378156 UBE2FQ969M7 185 aa14.09□□□□□ -0.15
NPHP4-201ENST00000378156 H0YGG7 62 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 SRPX2O60687 465 aaPredicted RBP14.08□□□□□ -0.16
NPHP4-201ENST00000378156 CPOQ8IVL8 374 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 NAXEQ8NCW5 288 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 NAA11Q9BSU3 229 aaPredicted RBP14.08□□□□□ -0.16
NPHP4-201ENST00000378156 DUSP23Q9BVJ7 150 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 TMEM121BQ9BXQ6 578 aaPredicted RBP14.08□□□□□ -0.16
NPHP4-201ENST00000378156 TMEM52BQ4KMG9 183 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 ZNF709Q8N972 641 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 WDR20Q8TBZ3 569 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 CDS1Q92903 461 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 OR2S2Q9NQN1 319 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 UCHL1P09936 223 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 ARAFP10398 606 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 RBMS1P29558 406 aaKnown RBP14.08□□□□□ -0.16
NPHP4-201ENST00000378156 MFSD13AQ14CX5 517 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 FAM174AQ8TBP5 190 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 NAT6Q93015 286 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 COQ10AQ96MF6 247 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 LTB4R2Q9NPC1 389 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 KLHL21Q9UJP4 597 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 SMAD9O15198 467 aaKnown RBP14.08□□□□□ -0.16
NPHP4-201ENST00000378156 GRPRP30550 384 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 PFN3P60673 137 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 COX20Q5RI15 118 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 LEG1Q6P5S2 330 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 OR9A4Q8NGU2 314 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 OR2T35Q8NGX2 323 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 SCGB1C1Q8TD33 95 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 TMEM239Q8WW34 195 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 TCTEX1D2Q8WW35 142 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 MSLNLQ96KJ4 702 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 PPT2Q9UMR5 302 aa14.08□□□□□ -0.16
NPHP4-201ENST00000378156 CTDSP2O14595 271 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 PEX11BO96011 259 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 CPMP14384 443 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 EIF2DP41214 584 aaKnown RBP14.07□□□□□ -0.16
NPHP4-201ENST00000378156 DCST2Q5T1A1 773 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 ANKRD34AQ69YU3 496 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 PODNL1Q6PEZ8 512 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 DNAJC22Q8N4W6 341 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 SFXN5Q8TD22 340 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 OR10A4Q9H209 315 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 SCN1AP35498 2009 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 NPIPA5A0A0B4J1W7 369 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 NPIPA7E9PJI5 369 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 PRAF2O60831 178 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 RFPL3O75679 317 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 IFNA1P01562 189 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 NPIPA8P0DM63 369 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 SSTR4P31391 388 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 PARM1Q6UWI2 310 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 CYB561A3Q8NBI2 242 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 OR52R1Q8NGF1 315 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 OR51L1Q8NGJ5 315 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 PRRC1Q96M27 445 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 EIF5A2Q9GZV4 153 aaKnown RBP14.07□□□□□ -0.16
NPHP4-201ENST00000378156 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-201ENST00000378156 BCAT2O15382 392 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-201ENST00000378156 PRKACAP17612 351 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 RIDAP52758 137 aaKnown RBP14.07□□□□□ -0.16
NPHP4-201ENST00000378156 EXOSC7Q15024 291 aaKnown RBP14.07□□□□□ -0.16
NPHP4-201ENST00000378156 TMEM205Q6UW68 189 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 SHISA6Q6ZSJ9 500 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 BHLHA9Q7RTU4 235 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 PRR22Q8IZ63 422 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 RHOXF1Q8NHV9 184 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 ADAMTS19Q8TE59 1207 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 CNOT9Q92600 299 aaKnown RBP14.07□□□□□ -0.16
NPHP4-201ENST00000378156 SLC5A7Q9GZV3 580 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 DHDHQ9UQ10 334 aa14.07□□□□□ -0.16
NPHP4-201ENST00000378156 TRBV4-1A0A0J9YWV2 114 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 A8MVJ9 347 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 SEC14L5O43304 696 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 SEC14L2O76054 403 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 GASTP01350 101 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 PNMTP11086 282 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 ACTBP60709 375 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 ACTG1P63261 375 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 NKAPLQ5M9Q1 402 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 ZER1Q7Z7L7 766 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 GTPBP8Q8N3Z3 284 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-201ENST00000378156 MFSD9Q8NBP5 474 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms