RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 G6PDP11413 515 aa18.81■□□□□ 0.6
VSX1-201ENST00000376707 RNF144AP50876 292 aaPredicted RBP18.81■□□□□ 0.6
VSX1-201ENST00000376707 ABCE1P61221 599 aaKnown RBP18.81■□□□□ 0.6
VSX1-201ENST00000376707 STAC2Q6ZMT1 411 aa18.81■□□□□ 0.6
VSX1-201ENST00000376707 C20orf204Q6ZNR8 217 aa18.81■□□□□ 0.6
VSX1-201ENST00000376707 BEND4Q6ZU67 534 aa18.81■□□□□ 0.6
VSX1-201ENST00000376707 ZNF781Q8N8C0 355 aa18.81■□□□□ 0.6
VSX1-201ENST00000376707 NUDT8Q8WV74 236 aa18.81■□□□□ 0.6
VSX1-201ENST00000376707 MOAP1Q96BY2 351 aa18.81■□□□□ 0.6
VSX1-201ENST00000376707 SMR3AQ99954 134 aa18.81■□□□□ 0.6
VSX1-201ENST00000376707 ZNF395Q9H8N7 513 aaPredicted RBP18.81■□□□□ 0.6
VSX1-201ENST00000376707 TIGARQ9NQ88 270 aa18.81■□□□□ 0.6
VSX1-201ENST00000376707 GPATCH2Q9NW75 528 aa18.81■□□□□ 0.6
VSX1-201ENST00000376707 NOP53Q9NZM5 478 aaKnown RBP18.81■□□□□ 0.6
VSX1-201ENST00000376707 CARD8Q9Y2G2 431 aa18.81■□□□□ 0.6
VSX1-201ENST00000376707 GTPBP1O00178 669 aaKnown RBP18.8■□□□□ 0.6
VSX1-201ENST00000376707 ELK4P28324 431 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 P2RX1P51575 399 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 SUMO3P55854 103 aaPredicted RBP18.8■□□□□ 0.6
VSX1-201ENST00000376707 CLDN8P56748 225 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 MPP2Q14168 576 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 KLHL26Q53HC5 615 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 BEX5Q5H9J7 111 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 CEP85LQ5SZL2 805 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 CBLN3Q6UW01 205 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 CROCCP2Q86T23 111 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 ZNF614Q8N883 585 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 SFXN5Q8TD22 340 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 ROBO4Q8WZ75 1007 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 DUSP26Q9BV47 211 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 C20orf27Q9GZN8 174 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 C12orf49Q9H741 205 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 HAO1Q9UJM8 370 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 RAP2CQ9Y3L5 183 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 KCNE3Q9Y6H6 103 aa18.8■□□□□ 0.6
VSX1-201ENST00000376707 VPS13CQ709C8 3753 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.79■□□□□ 0.6
VSX1-201ENST00000376707 GJE1A6NN92 205 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 ZNF195O14628 629 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 OIP5O43482 229 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 THBDP07204 575 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 MYZAPP0CAP1 466 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 LOXP28300 417 aaPredicted RBP18.79■□□□□ 0.6
VSX1-201ENST00000376707 ADH6P28332 368 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 SHC1P29353 583 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 AGTR1P30556 359 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 SOAT1P35610 550 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 ATP12AP54707 1039 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 ZNF239Q16600 458 aaKnown RBP18.79■□□□□ 0.6
VSX1-201ENST00000376707 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.79■□□□□ 0.6
VSX1-201ENST00000376707 BHLHB9Q6PI77 547 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 KIRREL3Q8IZU9 778 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 OR5AK3PQ8NH89 298 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 FBXO27Q8NI29 283 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 CPNE4Q96A23 557 aaPredicted RBP18.79■□□□□ 0.6
VSX1-201ENST00000376707 SORT1Q99523 831 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 ACTR6Q9GZN1 396 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 AKTIPQ9H8T0 292 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 ICAM5Q9UMF0 924 aa18.79■□□□□ 0.6
VSX1-201ENST00000376707 GPC6Q9Y625 555 aaPredicted RBP18.79■□□□□ 0.6
VSX1-201ENST00000376707 SLC1A6P48664 564 aa18.78■□□□□ 0.6
VSX1-201ENST00000376707 RPL14P50914 215 aaKnown RBP18.78■□□□□ 0.6
VSX1-201ENST00000376707 HBA1P69905 142 aa18.78■□□□□ 0.6
VSX1-201ENST00000376707 LTBQ06643 244 aa18.78■□□□□ 0.6
VSX1-201ENST00000376707 RNPS1Q15287 305 aaKnown RBP18.78■□□□□ 0.6
VSX1-201ENST00000376707 PDCD2Q16342 344 aaPredicted RBP18.78■□□□□ 0.6
VSX1-201ENST00000376707 PGS1Q32NB8 556 aa18.78■□□□□ 0.6
VSX1-201ENST00000376707 TMEM201Q5SNT2 666 aa18.78■□□□□ 0.6
VSX1-201ENST00000376707 CLEC9AQ6UXN8 241 aa18.78■□□□□ 0.6
VSX1-201ENST00000376707 Q71RC1 249 aaPredicted RBP18.78■□□□□ 0.6
VSX1-201ENST00000376707 WFDC8Q8IUA0 241 aa18.78■□□□□ 0.6
VSX1-201ENST00000376707 RNF128Q8TEB7 428 aa18.78■□□□□ 0.6
VSX1-201ENST00000376707 PERPQ96FX8 193 aa18.78■□□□□ 0.6
VSX1-201ENST00000376707 OR7D2Q96RA2 312 aa18.78■□□□□ 0.6
VSX1-201ENST00000376707 GPR52Q9Y2T5 361 aa18.78■□□□□ 0.6
VSX1-201ENST00000376707 DTNAQ9Y4J8 743 aa18.78■□□□□ 0.6
VSX1-201ENST00000376707 ESPNB1AK53 854 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 KLF4O43474 513 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 NR1H2P55055 460 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 NDUFAF6Q330K2 333 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 TMEM176BQ3YBM2 270 aaPredicted RBP18.77■□□□□ 0.6
VSX1-201ENST00000376707 LRRC34Q8IZ02 419 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 TMCO5AQ8N6Q1 288 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 ATP6V1C2Q8NEY4 427 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 OR5D16Q8NGK9 328 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 RFWD2Q8NHY2 731 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 GPR119Q8TDV5 335 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 ABHD3Q8WU67 409 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 SRXN1Q9BYN0 137 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 CENPHQ9H3R5 247 aa18.77■□□□□ 0.6
VSX1-201ENST00000376707 NUP214P35658 2090 aaPredicted RBP18.77■□□□□ 0.59
VSX1-201ENST00000376707 FAM171A2A8MVW0 826 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 NPIPB9F8W1W9 429 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 EFNA2O43921 213 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 PRKCAP17252 672 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 PSMB1P20618 241 aaKnown RBP18.76■□□□□ 0.59
VSX1-201ENST00000376707 BGNP21810 368 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 CCR4P51679 360 aa18.76■□□□□ 0.59
VSX1-201ENST00000376707 TOMM34Q15785 309 aaPredicted RBP18.76■□□□□ 0.59
VSX1-201ENST00000376707 PRSS57Q6UWY2 283 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms