RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 C16orf58Q96GQ5 468 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 ZIM3Q96PE6 472 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 TMEM204Q9BSN7 226 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 SERINC1Q9NRX5 453 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 SIRT3Q9NTG7 399 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-204ENST00000376643 ZNF701Q9NV72 531 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-204ENST00000376643 DTNAQ9Y4J8 743 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 TLDC2A0PJX2 215 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 ZNF195O14628 629 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 CFLARO15519 480 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 PEX11AO75192 247 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 SNUPNO95149 360 aaKnown RBP13.16□□□□□ -0.3
HDAC6-204ENST00000376643 CNOT4O95628 575 aaKnown RBP13.16□□□□□ -0.3
HDAC6-204ENST00000376643 THBDP07204 575 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 CD3EP07766 207 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 YES1P07947 543 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 LOXP28300 417 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-204ENST00000376643 ALDH3A1P30838 453 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 RAC3P60763 192 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 RPS4XP62701 263 aaKnown RBP13.16□□□□□ -0.3
HDAC6-204ENST00000376643 SMU1Q2TAY7 513 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 XKR7Q5GH72 579 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 ADAM5Q6NVV9 412 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 C3orf33Q6P1S2 294 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 FCRLAQ7L513 359 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 TMCO5AQ8N6Q1 288 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 ZNF614Q8N883 585 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 BANPQ8N9N5 519 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 OR7A2PQ8NGA2 310 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 POC1BQ8TC44 478 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 TMEM234Q8WY98 164 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 GTPBP3Q969Y2 492 aaKnown RBP13.16□□□□□ -0.3
HDAC6-204ENST00000376643 COQ8BQ96D53 544 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 SMR3AQ99954 134 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 POTEKPQ9BYX7 375 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 ROPN1BQ9BZX4 212 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-204ENST00000376643 C12orf49Q9H741 205 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 ROPN1Q9HAT0 212 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-204ENST00000376643 ICAM5Q9UMF0 924 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 PCDHGB4Q9UN71 923 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 RNF115Q9Y4L5 304 aa13.16□□□□□ -0.3
HDAC6-204ENST00000376643 SPIN1Q9Y657 262 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-204ENST00000376643 ZNF264O43296 627 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 LY6G6DO95868 133 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 CHRNGP07510 517 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 NUDT17P0C025 328 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 LAMP1P11279 417 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 UBL4AP11441 157 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 FKBP2P26885 142 aaKnown RBP13.15□□□□□ -0.3
HDAC6-204ENST00000376643 ATP5J2P56134 94 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 C21orf58P58505 322 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 UGT3A2Q3SY77 523 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 TMEM176BQ3YBM2 270 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-204ENST00000376643 SFRP5Q5T4F7 317 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 TFAP2EQ6VUC0 442 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 Q71RC1 249 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-204ENST00000376643 ZAR1Q86SH2 424 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 OR5W2Q8NH69 310 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 FBXO27Q8NI29 283 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 PPP1R14CQ8TAE6 165 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 ABHD3Q8WU67 409 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 SLC25A43Q8WUT9 341 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-204ENST00000376643 ST8SIA1Q92185 356 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 FBXW5Q969U6 566 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 TUBGCP3Q96CW5 907 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 DUSP26Q9BV47 211 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 NMUR2Q9GZQ4 415 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
HDAC6-204ENST00000376643 EXD2Q9NVH0 621 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 FAIMQ9NVQ4 179 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 FBXO34Q9NWN3 711 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 NOP53Q9NZM5 478 aaKnown RBP13.15□□□□□ -0.3
HDAC6-204ENST00000376643 CARD8Q9Y2G2 431 aa13.15□□□□□ -0.3
HDAC6-204ENST00000376643 DSCAMO60469 2012 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 SMAD7O15105 426 aaKnown RBP13.14□□□□□ -0.31
HDAC6-204ENST00000376643 SLU7O95391 586 aaKnown RBP13.14□□□□□ -0.31
HDAC6-204ENST00000376643 C6orf47O95873 294 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 OPN1LWP04000 364 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 PRKCAP17252 672 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 SOAT1P35610 550 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 CSNK2A1P68400 391 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-204ENST00000376643 ITGADQ13349 1161 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 PTGR1Q14914 329 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 SLC25A53Q5H9E4 307 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 C6orf136Q5SQH8 315 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 IL23RQ5VWK5 629 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 GABRG1Q8N1C3 465 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 VPS37AQ8NEZ2 397 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 GPR119Q8TDV5 335 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 ROBO4Q8WZ75 1007 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 AKAP1Q92667 903 aaKnown RBP eCLIP13.14□□□□□ -0.31
HDAC6-204ENST00000376643 S100PBPQ96BU1 408 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 ZHX1-C8orf76Q96EF9 292 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 OTUB1Q96FW1 271 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-204ENST00000376643 BCO1Q9HAY6 547 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 GPATCH2Q9NW75 528 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 EMC3Q9P0I2 261 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 LGALS13Q9UHV8 139 aa13.14□□□□□ -0.31
HDAC6-204ENST00000376643 TMEM233B4DJY2 109 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 ETV2O00321 342 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms