RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 TSEN15Q8WW01 171 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TBC1D20Q96BZ9 403 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SLC35A4Q96G79 324 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SLITRK2Q9H156 845 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 HRASLS2Q9NWW9 162 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SIDT1Q9NXL6 827 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ACSL5Q9ULC5 683 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FLVCR2Q9UPI3 526 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ANXA3P12429 323 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 RFPL4BQ6ZWI9 263 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 COMMD2Q86X83 199 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 GJD3Q8N144 294 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 CLDN22Q8N7P3 220 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR7G2Q8NG99 324 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SMPDL3BQ92485 455 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 UPRTQ96BW1 309 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SPACA7Q96KW9 195 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ORAI3Q9BRQ5 295 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TTYH1Q9H313 450 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PRSS16Q9NQE7 514 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 VWA8A3KMH1 1905 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SGK494L7N484 410 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 CDC42EP2O14613 210 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 LIPCP11150 499 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ARL4DP49703 201 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ABHD17CQ6PCB6 329 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FAM220AQ7Z4H9 259 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 LINC00471Q8N535 108 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR5M3Q8NGP4 307 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 RPLP0P6Q8NHW5 317 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 HS6ST2Q96MM7 605 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR14A2Q96R54 314 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SLC17A9Q9BYT1 436 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SLC7A5P2Q9GIP4 190 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 B3GAT2Q9NPZ5 323 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 CACNG2Q9Y698 323 aa13.4□□□□□ -0.26
TNFRSF1B-201ENST00000376259 KNTC1P50748 2209 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CDHR4A6H8M9 788 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 URADA6NGE7 173 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RNF13O43567 381 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ICMTO60725 284 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FZD7O75084 574 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PLGP00747 810 aaPredicted RBP13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 EIF4EP06730 217 aaKnown RBP13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 H2AFB2P0C5Z0 115 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CPEP16870 476 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 DGCR2P98153 550 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR1Q1Q15612 314 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SMAD2Q15796 467 aaKnown RBP13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR7G1Q8NGA0 311 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR2A1Q8NGT9 310 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 COQ10AQ96MF6 247 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 C1QTNF7Q9BXJ2 289 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 C20orf141Q9NUB4 165 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ATXN7L1Q9ULK2 861 aaPredicted RBP13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RCE1Q9Y256 329 aa13.4□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CENPBD1B2RD01 187 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 B4DGG1 531 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CLEC3AO75596 197 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HSD17B2P37059 387 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OPRD1P41143 372 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ERVK-25P63136 954 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PDE7AQ13946 482 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SF3A2Q15428 464 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR2L3Q8NG85 312 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MS4A6EQ96DS6 147 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ADAD1Q96M93 576 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ACSS1Q9NUB1 689 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GPR34Q9UPC5 381 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ADAM18Q9Y3Q7 739 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CDH10Q9Y6N8 788 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 EYSQ5T1H1 3165 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ANXA2P2A6NMY6 339 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ANXA2P07355 339 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 UCHL1P09936 223 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HOXB9P17482 250 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ETV6P41212 452 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HMGA2P52926 109 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MAZP56270 477 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF77Q15935 545 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OCLNQ16625 522 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HSD17B12Q53GQ0 312 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FAAH2Q6GMR7 532 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF322Q6U7Q0 402 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 JAZF1Q86VZ6 243 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TMPRSS12Q86WS5 348 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SIAH3Q8IW03 269 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GOT1L1Q8NHS2 421 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HCAR1Q9BXC0 346 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SLC38A1Q9H2H9 487 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR51J1Q9H342 316 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MTHFD2LQ9H903 347 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 APOBEC3BQ9UH17 382 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 LIPT1Q9Y234 373 aa13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF443Q9Y2A4 671 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CENPVL1A0A0U1RR11 272 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CIB4A0PJX0 185 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TRAPPC13A5PLN9 417 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 POM121BA6NF01 834 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 LANCL1O43813 399 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms