RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 OPN1LWP04000 364 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 SNRPB2P08579 225 aaKnown RBP14.4□□□□□ -0.1
C11orf88-202ENST00000375618 HOXD4P09016 255 aaPredicted RBP14.4□□□□□ -0.1
C11orf88-202ENST00000375618 UBTFL6P0CB48 400 aaPredicted RBP14.4□□□□□ -0.1
C11orf88-202ENST00000375618 POU3F2P20265 443 aaPredicted RBP14.4□□□□□ -0.1
C11orf88-202ENST00000375618 AGAP20933 346 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 DRD4P21917 467 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 CEACAM8P31997 349 aaPredicted RBP14.4□□□□□ -0.1
C11orf88-202ENST00000375618 PTGER4P35408 488 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 GCKP35557 465 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 MAGEA8P43361 318 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 ANXA11P50995 505 aaKnown RBP14.4□□□□□ -0.1
C11orf88-202ENST00000375618 ZNF41P51814 821 aaPredicted RBP14.4□□□□□ -0.1
C11orf88-202ENST00000375618 ART3Q13508 389 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 BCL2A1Q16548 175 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 RUNDC3AQ59EK9 446 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 RIPPLY2Q5TAB7 128 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 POMZP3Q6PJE2 187 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 DHDDSQ86SQ9 333 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 VRK2Q86Y07 508 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 EID3Q8N140 333 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 OR5W2Q8NH69 310 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 SMPDL3BQ92485 455 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 CNOT9Q92600 299 aaKnown RBP14.4□□□□□ -0.1
C11orf88-202ENST00000375618 PIGQQ9BRB3 760 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 LAT2Q9GZY6 243 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 ARMCX1Q9P291 453 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 CLCF1Q9UBD9 225 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 P2RX2Q9UBL9 471 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 NDUFAF1Q9Y375 327 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 CHST2Q9Y4C5 530 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 ARHGAP21Q5T5U3 1957 aa14.4□□□□□ -0.1
C11orf88-202ENST00000375618 NKX2-6A6NCS4 301 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 MBD3L4A6NDZ8 208 aaPredicted RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 MBD3L3A6NE82 208 aaPredicted RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 MBD3L5A6NJ08 208 aaPredicted RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 FAM90A27PA6NNH2 459 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 PRSS44E7EML9 344 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 SEC14L5O43304 696 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 EIF4E2O60573 245 aaKnown RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 CLDN14O95500 239 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 TGM6O95932 706 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 ZNF17P17021 662 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 PRKCAP17252 672 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 GPX2P18283 190 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 HTR1EP28566 365 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 LSP1P33241 339 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 CCR4P51679 360 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 SUMO3P55854 103 aaPredicted RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 HPCAP84074 193 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 CAPRIN1Q14444 709 aaKnown RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 QPRTQ15274 297 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 CTU2Q2VPK5 515 aaKnown RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 LACC1Q8IV20 430 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 TMCO5AQ8N6Q1 288 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 OR10Q1Q8NGQ4 319 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 MBD3L2Q8NHZ7 208 aaPredicted RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 FBXO27Q8NI29 283 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 TSPEARQ8WU66 669 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 ZBTB8AQ96BR9 441 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 DTNBP1Q96EV8 351 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 ZNF845Q96IR2 970 aaPredicted RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 TREX2Q9BQ50 279 aaPredicted RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 THUMPD3Q9BV44 507 aaKnown RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 TMEM185BQ9H7F4 350 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 MTHFD2LQ9H903 347 aaPredicted RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 A4GALTQ9NPC4 353 aa14.39□□□□□ -0.11
C11orf88-202ENST00000375618 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.39□□□□□ -0.11
C11orf88-202ENST00000375618 HEATR5AQ86XA9 2040 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 FXYD1O00168 92 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 AP3D1O14617 1153 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 ANGPT2O15123 496 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 NUDT14O95848 222 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 PEPDP12955 493 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 CHRNB4P30926 498 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 ZNF136P52737 540 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 MTPNP58546 118 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 KCNJ10P78508 379 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 TFF3Q07654 80 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 FOXF2Q12947 444 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 NFYCQ13952 458 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 ADRM1Q16186 407 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 ZNF787Q6DD87 383 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 EIF3MQ7L2H7 374 aaKnown RBP14.38□□□□□ -0.11
C11orf88-202ENST00000375618 SNX32Q86XE0 403 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 RELL2Q8NC24 303 aaPredicted RBP14.38□□□□□ -0.11
C11orf88-202ENST00000375618 LILRB4Q8NHJ6 448 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 OIT3Q8WWZ8 545 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 FIG4Q92562 907 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 ADGRG7Q96K78 797 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 ANKRD27Q96NW4 1050 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 UCN2Q96RP3 112 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 CGREF1Q99674 301 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 ELAC2Q9BQ52 826 aaKnown RBP14.38□□□□□ -0.11
C11orf88-202ENST00000375618 SLC39A3Q9BRY0 314 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 HHATLQ9HCP6 504 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.38□□□□□ -0.11
C11orf88-202ENST00000375618 RLIMQ9NVW2 624 aa14.38□□□□□ -0.11
C11orf88-202ENST00000375618 DNAJB12Q9NXW2 375 aaKnown RBP14.38□□□□□ -0.11
C11orf88-202ENST00000375618 AP4B1Q9Y6B7 739 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms