RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 RAB6CQ9H0N0 254 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 TBC1D17Q9HA65 648 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 CFAP20Q9Y6A4 193 aaKnown RBP8.37□□□□□ -1.07
UBR4-201ENST00000375218 GBF1Q92538 1859 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 NYNRINQ9P2P1 1898 aaKnown RBP8.37□□□□□ -1.07
UBR4-201ENST00000375218 TRAV26-1A0A087WT03 109 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 H0Y8X5 98 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 I6L893 689 aaPredicted RBP8.37□□□□□ -1.07
UBR4-201ENST00000375218 SERPIND1P05546 499 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 TPH1P17752 444 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 MLLT10P55197 1068 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 MAZP56270 477 aaKnown RBP8.37□□□□□ -1.07
UBR4-201ENST00000375218 WNT3P56703 355 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 KRR1Q13601 381 aaKnown RBP8.37□□□□□ -1.07
UBR4-201ENST00000375218 SLC22A6Q4U2R8 563 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 GPALPP1Q8IXQ4 340 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 LRRC57Q8N9N7 239 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 FAM110BQ8TC76 370 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 C14orf144Q96I85 54 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 CLSTN3Q9BQT9 956 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 TCEAL7Q9BRU2 100 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 WDR41Q9HAD4 459 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 BIN3Q9NQY0 253 aa8.37□□□□□ -1.07
UBR4-201ENST00000375218 TCRBV5S1A1TA0A578 114 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 C7orf72A4D263 438 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 CCT8L1PA6NM43 557 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 TMEM189-UBE2V1I3L0A0 370 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 SLC16A4O15374 487 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 DLEU1O43261 78 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 OR6A2O95222 327 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 BMP15O95972 392 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 GOT1P17174 413 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 RAB9AP51151 201 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 ADPRHP54922 357 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 CDKN3Q16667 212 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 DUSP7Q16829 419 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 RBM48Q5RL73 367 aaKnown RBP8.36□□□□□ -1.07
UBR4-201ENST00000375218 MANEALQ5VSG8 457 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 LIPKQ5VXJ0 399 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 CENPSQ8N2Z9 138 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 OR1L6Q8NGR2 347 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 PTPMT1Q8WUK0 201 aaPredicted RBP8.36□□□□□ -1.07
UBR4-201ENST00000375218 EXTL1Q92935 676 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 L3HYPDHQ96EM0 354 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 TMEM176AQ96HP8 235 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 PNKPQ96T60 521 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 FTHL17Q9BXU8 183 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 MRPL13Q9BYD1 178 aaKnown RBP8.36□□□□□ -1.07
UBR4-201ENST00000375218 ING2Q9H160 280 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 KCNIP3Q9Y2W7 256 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 FAM90A8PA6NJQ4 464 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 RGS5O15539 181 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 WIPF1O43516 503 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 PAGE4O60829 102 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 ACTL6AO96019 429 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 FAM90A13PP0C7W8 464 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 FAM90A24PP0C7X0 464 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 SERPINA2P20848 420 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 CD82P27701 267 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 ASCL1P50553 236 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 IDH3GP51553 393 aaPredicted RBP8.36□□□□□ -1.07
UBR4-201ENST00000375218 RPL19P84098 196 aaKnown RBP8.36□□□□□ -1.07
UBR4-201ENST00000375218 GRB14Q14449 540 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 SPNS3Q6ZMD2 512 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 DCDC5Q6ZRR9 648 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 ESPNLQ6ZVH7 1005 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 HDDC2Q7Z4H3 204 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 SHISA5Q8N114 240 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 WDR89Q96FK6 387 aaPredicted RBP8.36□□□□□ -1.07
UBR4-201ENST00000375218 SLC38A2Q96QD8 506 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 LMF2Q9BU23 707 aaKnown RBP8.36□□□□□ -1.07
UBR4-201ENST00000375218 PTDSS2Q9BVG9 487 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 SLC25A32Q9H2D1 315 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 THSD1Q9NS62 852 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 CRIM1Q9NZV1 1036 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 CSNK1G3Q9Y6M4 447 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 PLXNA4Q9HCM2 1894 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 GRID2IPA4D2P6 1211 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 G3V2T6 193 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 H3BNX3 289 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 TOX4O94842 621 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 ANXA7P20073 488 aaKnown RBP8.36□□□□□ -1.07
UBR4-201ENST00000375218 MARK3P27448 753 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 TAS2R41P59536 307 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 BTN1A1Q13410 526 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 TFDP2Q14188 446 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 EXOC3L2Q2M3D2 409 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 DLEU7Q6UYE1 221 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 GAREM2Q75VX8 874 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 UFD1Q92890 307 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 COQ10AQ96MF6 247 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 NEDD4LQ96PU5 975 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 CDCA3Q99618 268 aaPredicted RBP8.36□□□□□ -1.07
UBR4-201ENST00000375218 EGFL8Q99944 293 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 NIPSNAP1Q9BPW8 284 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.36□□□□□ -1.07
UBR4-201ENST00000375218 ENTPD2Q9Y5L3 495 aa8.36□□□□□ -1.07
UBR4-201ENST00000375218 SMG1Q96Q15 3661 aaKnown RBP8.36□□□□□ -1.07
UBR4-201ENST00000375218 A0A1B0GVM2 712 aa8.35□□□□□ -1.07
UBR4-201ENST00000375218 B4GALT3O60512 393 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms