RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 FAM25GB3EWG6 89 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 PLOD3O60568 738 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 GTF2E2P29084 291 aaKnown RBP16.93■□□□□ 0.3
RXRB-202ENST00000374685 HTR3AP46098 478 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 CDH11P55287 796 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 CSTF1Q05048 431 aaKnown RBP16.93■□□□□ 0.3
RXRB-202ENST00000374685 GDPD3Q7L5L3 318 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 GHDCQ8N2G8 530 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 TMEM163Q8TC26 289 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 SPRTNQ9H040 489 aaPredicted RBP16.93■□□□□ 0.3
RXRB-202ENST00000374685 NLGN3Q9NZ94 848 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 ERVK-19Q9WJR5 959 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 TMEM184BQ9Y519 407 aaPredicted RBP16.93■□□□□ 0.3
RXRB-202ENST00000374685 TRAV27A0A087WT01 109 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 FAM221BA6H8Z2 402 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 DBIP07108 87 aaKnown RBP16.93■□□□□ 0.3
RXRB-202ENST00000374685 NID1P14543 1247 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 GLULP15104 373 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 DDOSTP39656 456 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 MTNR1AP48039 350 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 SLC36A4Q6YBV0 504 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 LINC00471Q8N535 108 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 NUAK2Q9H093 628 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 RACGAP1Q9H0H5 632 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 METTL15A6NJ78 407 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 SOCS6O14544 535 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 FOXS1O43638 330 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 RAB36O95755 333 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 CSF2P04141 144 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 NAGAP17050 411 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 MAKP20794 623 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 EMDP50402 254 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 NCF4Q15080 339 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 KLHL12Q53G59 568 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 YIF1BQ5BJH7 314 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 MBOAT2Q6ZWT7 520 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 GLRX5Q86SX6 157 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 NTMQ9P121 344 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 OR10H1Q9Y4A9 318 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 WDFY3Q8IZQ1 3526 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 CTDSP2O14595 271 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 ADAM11O75078 769 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 RNH1P13489 461 aaKnown RBP16.92■□□□□ 0.3
RXRB-202ENST00000374685 CTRB1P17538 263 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 S100A5P33763 92 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 CAPZBP47756 277 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 OR1D4P47884 311 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 FAM53BQ14153 422 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 OCLNQ16625 522 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 ZNF791Q3KP31 576 aaPredicted RBP16.92■□□□□ 0.3
RXRB-202ENST00000374685 EIPR1Q53HC9 387 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 TMEM201Q5SNT2 666 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 CTRB2Q6GPI1 263 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 RASSF6Q6ZTQ3 369 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 CPOQ8IVL8 374 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 UBQLNLQ8IYU4 475 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 CELF2-AS1Q8N7Q2 184 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 OR13C2Q8NGS9 318 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 SMAP2Q8WU79 429 aaPredicted RBP16.92■□□□□ 0.3
RXRB-202ENST00000374685 LMF1Q96S06 567 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 TM9SF2Q99805 663 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 ASPNQ9BXN1 380 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 PRTFDC1Q9NRG1 225 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 DUSP22Q9NRW4 184 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 THADAQ6YHU6 1953 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 HYKKA2RU49 373 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 TRAPPC13A5PLN9 417 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 CDHR4A6H8M9 788 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 ZNF217O75362 1048 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 OR5F1O95221 314 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 IGKV1D-16P01601 117 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 TSPAN19P0C672 248 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 IL9P15248 144 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 PSMA1P25786 263 aaKnown RBP16.92■□□□□ 0.3
RXRB-202ENST00000374685 PSG6Q00889 435 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 BNC1Q01954 994 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 DECR1Q16698 335 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 MINDY4Q4G0A6 757 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 PLBD1Q6P4A8 553 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 CD300LDQ6UXZ3 194 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 GJD3Q8N144 294 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 FAM109AQ8N4B1 249 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 NANOGP1Q8N7R0 232 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 FAM83FQ8NEG4 500 aaPredicted RBP16.92■□□□□ 0.3
RXRB-202ENST00000374685 DNAJA3Q96EY1 480 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 MAP6Q96JE9 813 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 ST6GAL2Q96JF0 529 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 SMAD5Q99717 465 aaKnown RBP16.92■□□□□ 0.3
RXRB-202ENST00000374685 MMP27Q9H306 513 aa16.92■□□□□ 0.3
RXRB-202ENST00000374685 IGLV3-19P01714 112 aa16.91■□□□□ 0.3
RXRB-202ENST00000374685 SCG5P05408 212 aa16.91■□□□□ 0.3
RXRB-202ENST00000374685 PIPP12273 146 aaPredicted RBP16.91■□□□□ 0.3
RXRB-202ENST00000374685 CD27P26842 260 aa16.91■□□□□ 0.3
RXRB-202ENST00000374685 RPS7P62081 194 aaKnown RBP16.91■□□□□ 0.3
RXRB-202ENST00000374685 ZNHIT3Q15649 155 aaPredicted RBP16.91■□□□□ 0.3
RXRB-202ENST00000374685 MEDAGQ5VYS4 303 aa16.91■□□□□ 0.3
RXRB-202ENST00000374685 LYPD8Q6UX82 237 aa16.91■□□□□ 0.3
RXRB-202ENST00000374685 ZNF620Q6ZNG0 422 aa16.91■□□□□ 0.3
RXRB-202ENST00000374685 TTLL10Q6ZVT0 673 aa16.91■□□□□ 0.3
RXRB-202ENST00000374685 UTS2BQ765I0 119 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms