RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 JADE3Q92613 823 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 ZNF524Q96C55 264 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 FAM120BQ96EK7 910 aaKnown RBP12.24□□□□□ -0.45
CXCL12-202ENST00000374426 BTBD2Q9BX70 525 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 POTEKPQ9BYX7 375 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 TRIM2Q9C040 744 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 C12orf65Q9H3J6 166 aaKnown RBP12.24□□□□□ -0.45
CXCL12-202ENST00000374426 TUBB1Q9H4B7 451 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 SIRT3Q9NTG7 399 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-202ENST00000374426 ING1Q9UK53 422 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-202ENST00000374426 ICAM5Q9UMF0 924 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 SNX8Q9Y5X2 465 aa12.24□□□□□ -0.45
CXCL12-202ENST00000374426 A0A1W2PP18 115 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 RGS14O43566 566 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 TLX2O43763 284 aaPredicted RBP12.23□□□□□ -0.45
CXCL12-202ENST00000374426 CD5LO43866 347 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 ADAM11O75078 769 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 PRKD3O94806 890 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 HSPA4LO95757 839 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 CD8AP01732 235 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 TP53P04637 393 aaPredicted RBP12.23□□□□□ -0.45
CXCL12-202ENST00000374426 HMGN2P05204 90 aaKnown RBP12.23□□□□□ -0.45
CXCL12-202ENST00000374426 YES1P07947 543 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 FAM153BP0C7A2 387 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 ENPP1P22413 925 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 RPL38P63173 70 aaKnown RBP12.23□□□□□ -0.45
CXCL12-202ENST00000374426 FAPQ12884 760 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 LASP1Q14847 261 aaKnown RBP12.23□□□□□ -0.45
CXCL12-202ENST00000374426 FAM153CQ494X1 144 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 KLHL26Q53HC5 615 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.23□□□□□ -0.45
CXCL12-202ENST00000374426 HMBOX1Q6NT76 420 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 LRIG3Q6UXM1 1119 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 MTERF4Q7Z6M4 381 aaKnown RBP12.23□□□□□ -0.45
CXCL12-202ENST00000374426 TDRPQ86YL5 185 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 MNS1Q8NEH6 495 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 ZFP90Q8TF47 636 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 CDS1Q92903 461 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 STACQ99469 402 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 TXLNGYQ9BZA5 131 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 DUSP22Q9NRW4 184 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 ZCCHC3Q9NUD5 404 aaKnown RBP12.23□□□□□ -0.45
CXCL12-202ENST00000374426 OXSMQ9NWU1 459 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 GIN1Q9NXP7 522 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 GDF2Q9UK05 429 aaPredicted RBP12.23□□□□□ -0.45
CXCL12-202ENST00000374426 CARD8Q9Y2G2 431 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 ACTL7BQ9Y614 415 aa12.23□□□□□ -0.45
CXCL12-202ENST00000374426 IGHV3-15A0A0B4J1V0 119 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 NPIPA5A0A0B4J1W7 369 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 GJE1A6NN92 205 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 NPIPA7E9PJI5 369 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 AZIN1O14977 448 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 LSM1O15116 133 aaKnown RBP12.22□□□□□ -0.45
CXCL12-202ENST00000374426 RAMP1O60894 148 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 NUDT14O95848 222 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 NPIPA8P0DM63 369 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 NEFHP12036 1026 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 CPA3P15088 417 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 PRKCAP17252 672 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 EDNRAP25101 427 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 P2RX1P51575 399 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 SUMO3P55854 103 aaPredicted RBP12.22□□□□□ -0.45
CXCL12-202ENST00000374426 MLC1Q15049 377 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 NDUFAF6Q330K2 333 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 CCDC153Q494R4 210 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 RNF165Q6ZSG1 346 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 Q6ZT83 130 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 BHLHA15Q7RTS1 189 aaPredicted RBP12.22□□□□□ -0.45
CXCL12-202ENST00000374426 HIPK1Q86Z02 1210 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 SLC43A2Q8N370 569 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 ATP6V1C2Q8NEY4 427 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 GPR119Q8TDV5 335 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 CHMP6Q96FZ7 201 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 USB1Q9BQ65 265 aaKnown RBP12.22□□□□□ -0.45
CXCL12-202ENST00000374426 PSD2Q9BQI7 771 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 TRAF4Q9BUZ4 470 aaPredicted RBP12.22□□□□□ -0.45
CXCL12-202ENST00000374426 PIGUQ9H490 435 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 CXorf36Q9H7Y0 433 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 BCO1Q9HAY6 547 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 YAE1D1Q9NRH1 226 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 FIS1Q9Y3D6 152 aa12.22□□□□□ -0.45
CXCL12-202ENST00000374426 GPC6Q9Y625 555 aaPredicted RBP12.22□□□□□ -0.45
CXCL12-202ENST00000374426 RNF212BA8MTL3 300 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 SHISA9B4DS77 424 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 KIF2AO00139 706 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-202ENST00000374426 LYZL6O75951 148 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 LINC00032P0C843 101 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 BCKDHAP12694 445 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 ATP6V1C1P21283 382 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 OR3A2P47893 321 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 RAC3P60763 192 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 LIPMQ5VYY2 423 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 KANK2Q63ZY3 851 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 CDC73Q6P1J9 531 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 PODNL1Q6PEZ8 512 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 DTX2Q86UW9 622 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 PHC2Q8IXK0 858 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 CNPY4Q8N129 248 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 ZNF527Q8NB42 609 aa12.21□□□□□ -0.45
CXCL12-202ENST00000374426 MTERF3Q96E29 417 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms