RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 GATSQ8NAP1 163 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 HS6ST2Q96MM7 605 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 SDHCQ99643 169 aaPredicted RBP14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 OR51V1Q9H2C8 321 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 PRTFDC1Q9NRG1 225 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 A3GALT2U3KPV4 340 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 A0A1B0GWA3 101 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 A8MUA0 341 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 GLULP15104 373 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 BMP7P18075 431 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 NOS3P29474 1203 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 MLLT3P42568 568 aaPredicted RBP14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 SLC9A3P48764 834 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 RORCP51449 518 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 RAB15P59190 212 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 RPS7P62081 194 aaKnown RBP14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 TDGQ13569 410 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 COL19A1Q14993 1142 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 GXYLT1Q4G148 440 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 SNAP47Q5SQN1 464 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 RNLSQ5VYX0 342 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 CCDC190Q86UF4 302 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 KLBQ86Z14 1044 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 CAMKK1Q8N5S9 505 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 SPRYD4Q8WW59 207 aaPredicted RBP14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 TEX12Q9BXU0 123 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 TTTY10Q9BZA0 68 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 TMEM129A0AVI4 362 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 SLC35F4A4IF30 521 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 HRO43593 1189 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 NCR1O76036 304 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 BNC1Q01954 994 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 ZNF45Q02386 682 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 ELOCQ15369 112 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 ZNHIT3Q15649 155 aaPredicted RBP14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 AMZ1Q400G9 498 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 OR8H2Q8N162 312 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 OR52L1Q8NGH7 329 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 UFD1Q92890 307 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 RFKQ969G6 155 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 DGAT2Q96PD7 388 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 SLC30A2Q9BRI3 323 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 PHF7Q9BWX1 381 aaPredicted RBP14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 TMEM27Q9HBJ8 222 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 MRPS18AQ9NVS2 196 aaKnown RBP14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 CLDN16Q9Y5I7 305 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 CLCA3PQ9Y6N3 262 aa14.76□□□□□ -0.05
CNKSR1-202ENST00000374253 CSNK1EP49674 416 aaKnown RBP14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 RPL6Q02878 288 aaKnown RBP14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 CHRDL2Q6WN34 429 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 SPATC1Q76KD6 591 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 TMEM99Q8N816 258 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 OR4C3Q8NH37 302 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 C16orf52Q8NHV5 167 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 ASB15Q8WXK1 588 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 VSTM2LQ96N03 204 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 ARHGAP9Q9BRR9 750 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 KRCC1Q9NPI7 259 aaPredicted RBP14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 PRDM9Q9NQV7 894 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 DNAJB12Q9NXW2 375 aaKnown RBP14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 TNFRSF10DQ9UBN6 386 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 EXOSC1Q9Y3B2 195 aaKnown RBP14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 SF3B6Q9Y3B4 125 aaKnown RBP14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 MED31Q9Y3C7 131 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 OR10H1Q9Y4A9 318 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 BHLHE40O14503 412 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 COQ9O75208 318 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 PPP1R3DO95685 299 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 NME1P15531 152 aaKnown RBP14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 ALAS2P22557 587 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 HTR1FP30939 366 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 OR1D4P47884 311 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 ALG10BQ5I7T1 473 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 NXNL2Q5VZ03 156 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 ZCCHC12Q6PEW1 402 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 ZNF321PQ8N8H1 164 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 EFHD2Q96C19 240 aaPredicted RBP14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 HSPA12BQ96MM6 686 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 TNFRSF13CQ96RJ3 184 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 ZNF649Q9BS31 505 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 MUTYHQ9UIF7 546 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 ALPK2Q86TB3 2170 aa14.75□□□□□ -0.05
CNKSR1-202ENST00000374253 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 C2orf92A0A1B0GVN3 265 aa14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 CD8B2A6NJW9 211 aa14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 C12orf71A8MTZ7 269 aa14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 GMFGO60234 142 aa14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 SNX4O95219 450 aa14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 CD8BP10966 210 aa14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 BMP8BP34820 402 aa14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 ACAA2P42765 397 aaKnown RBP14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 RUNX1T1Q06455 604 aa14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 CRYZQ08257 329 aaKnown RBP14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 ZNF181Q2M3W8 571 aa14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 PLK5Q496M5 336 aa14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 BMP8AQ7Z5Y6 402 aa14.74□□□□□ -0.05
CNKSR1-202ENST00000374253 OR51Q1Q8NH59 317 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms