RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 OR2W5A6NFC9 320 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 TTLL8A6PVC2 850 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 E7EQ34 232 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 NEDD8-MDP1E9PL57 170 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 H0YIV9 168 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 WRBO00258 174 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 TO15178 435 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 EIF4E2O60573 245 aaKnown RBP12.04□□□□□ -0.48
PRPF4-201ENST00000374198 CXCL14O95715 111 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 FURINP09958 794 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 ZNF35P13682 527 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 CCR7P32248 378 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 STARP49675 285 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 UBE2IP63279 158 aaKnown RBP12.04□□□□□ -0.48
PRPF4-201ENST00000374198 ZNF763Q0D2J5 394 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 C1orf53Q5VUE5 145 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 OR7E24Q6IFN5 339 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 ZNF783Q6ZMS7 281 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 GANCQ8TET4 914 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 SETD7Q8WTS6 366 aaKnown RBP12.04□□□□□ -0.48
PRPF4-201ENST00000374198 SLC25A28Q96A46 364 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 UTP23Q9BRU9 249 aaKnown RBP12.04□□□□□ -0.48
PRPF4-201ENST00000374198 JAM3Q9BX67 310 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 MAN2C1Q9NTJ4 1040 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 ABRACLQ9P1F3 81 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 MKL2Q9ULH7 1088 aa12.04□□□□□ -0.48
PRPF4-201ENST00000374198 POP7O75817 140 aaKnown RBP12.03□□□□□ -0.48
PRPF4-201ENST00000374198 MMP3P08254 477 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 MGMTP16455 207 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 ADCYAP1P18509 176 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 ATF1P18846 271 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 TBXA2RP21731 343 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 HSD17B2P37059 387 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 AP3S2P59780 193 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 RPS26P62854 115 aaKnown RBP12.03□□□□□ -0.48
PRPF4-201ENST00000374198 ECH1Q13011 328 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 TMEM44Q2T9K0 475 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 CLEC12AQ5QGZ9 265 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 C18orf63Q68DL7 685 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 FAM109BQ6ICB4 259 aaPredicted RBP12.03□□□□□ -0.48
PRPF4-201ENST00000374198 ARL9Q6T311 187 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 OR52B4Q8NGK2 314 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 ABHD4Q8TB40 342 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 FCRL4Q96PJ5 515 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 ORAI3Q9BRQ5 295 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 A4GALTQ9NPC4 353 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 MARCH2Q9P0N8 246 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 NINQ8N4C6 2090 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 F5H5P2 479 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 GBAP04062 536 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 CLTBP09497 229 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 PRF1P14222 555 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 PAICSP22234 425 aaKnown RBP12.03□□□□□ -0.48
PRPF4-201ENST00000374198 ACHEP22303 614 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 NOS3P29474 1203 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 HTR1FP30939 366 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 STAT5AP42229 794 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 MECP2P51608 486 aaKnown RBP12.03□□□□□ -0.48
PRPF4-201ENST00000374198 PDE7AQ13946 482 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 C2orf68Q2NKX9 166 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 LINC00303Q3SY05 128 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 TNFAIP8L2Q6P589 184 aaPredicted RBP12.03□□□□□ -0.48
PRPF4-201ENST00000374198 LINGO2Q7L985 606 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 CXXC5Q7LFL8 322 aaKnown RBP12.03□□□□□ -0.48
PRPF4-201ENST00000374198 BOLLQ8N9W6 283 aaKnown RBP12.03□□□□□ -0.48
PRPF4-201ENST00000374198 BBS1Q8NFJ9 593 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 OR5W2Q8NH69 310 aa12.03□□□□□ -0.48
PRPF4-201ENST00000374198 SEBOXQ9HB31 216 aaPredicted RBP12.03□□□□□ -0.48
PRPF4-201ENST00000374198 F5H5T6 163 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 B3GAT3O94766 335 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 CH25HO95992 272 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 TYMPP19971 482 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 SEMG2Q02383 582 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 KRT33BQ14525 404 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 RBMS2Q15434 407 aaKnown RBP12.02□□□□□ -0.48
PRPF4-201ENST00000374198 PRSS53Q2L4Q9 553 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 GRHL2Q6ISB3 625 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 HEPHL1Q6MZM0 1159 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 PXKQ7Z7A4 578 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 SIRT6Q8N6T7 355 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 PHOSPHO1Q8TCT1 267 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 CACYBPQ9HB71 228 aaKnown RBP12.02□□□□□ -0.48
PRPF4-201ENST00000374198 TRIM36Q9NQ86 728 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 MYO16Q9Y6X6 1858 aa12.02□□□□□ -0.48
PRPF4-201ENST00000374198 TMEM200CA6NKL6 621 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 M0R3H8 397 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 IGLV3-27P01718 113 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 ASGR2P07307 311 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 CBR1P16152 277 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 TYRP1P17643 537 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 UQCRC2P22695 453 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 ART1P52961 327 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 IL10RAQ13651 578 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF124Q15973 351 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 MAPK14Q16539 360 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 FCRLBQ6BAA4 426 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 SKA3Q8IX90 412 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 THEM5Q8N1Q8 247 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 NXPE1Q8N323 547 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 OR52I2Q8NH67 350 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms