RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 GNALP38405 381 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 PPP3R1P63098 170 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 RHAGQ02094 409 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 NFATC4Q14934 902 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 RBM12BQ8IXT5 1001 aaKnown RBP16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 CDRT4Q8N9R6 151 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 OR5W2Q8NH69 310 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 UBQLN3Q9H347 655 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 FBXO34Q9NWN3 711 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 OSGIN1Q9UJX0 560 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 F8A1P23610 371 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 TGFBR2P37173 567 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 CASP3P42574 277 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 RPL6Q02878 288 aaKnown RBP16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 DECR1Q16698 335 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 GID4Q8IVV7 300 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 ZNF619Q8N2I2 560 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 MFSD9Q8NBP5 474 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 PCNPQ8WW12 178 aaKnown RBP16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 A4GNTQ9UNA3 340 aa16.47■□□□□ 0.23
TRAF3IP1-201ENST00000373327 CTHP32929 405 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 CHST4Q8NCG5 386 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 RFT1Q96AA3 541 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 SDK2Q58EX2 2172 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 ARHGEF17Q96PE2 2063 aaPredicted RBP16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 PRAMEF25A6NGN4 478 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 H0YC42 278 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 MAS1P04201 325 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 CD6P30203 668 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 TNFRSF17Q02223 184 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 BAK1Q16611 211 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 LEG1Q6P5S2 330 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 NLRP8Q86W28 1048 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 OR8H3Q8N146 312 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 MOSPD2Q8NHP6 518 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 SLC37A2Q8TED4 501 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 TM9SF4Q92544 642 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 ADOQ96SZ5 270 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 GINS4Q9BRT9 223 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 C11orf54Q9H0W9 315 aaPredicted RBP16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 CD207Q9UJ71 328 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 NEUROG3Q9Y4Z2 214 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 AP1M2Q9Y6Q5 423 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 HTR3EA5X5Y0 456 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 GPR75O95800 540 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 YES1P07947 543 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 PEPDP12955 493 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 RPS27P42677 84 aaKnown RBP16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 DUSP2Q05923 314 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 ARHGAP40Q5TG30 622 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 AGAP6Q5VW22 663 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 OR8S1Q8NH09 359 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 AGAP4Q96P64 663 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 UGT2A1Q9Y4X1 527 aa16.46■□□□□ 0.23
TRAF3IP1-201ENST00000373327 PTPRDP23468 1912 aa16.46■□□□□ 0.22
TRAF3IP1-201ENST00000373327 TSC2P49815 1807 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 MRPS14O60783 128 aaKnown RBP16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 HBQ1P09105 142 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 TRHRP34981 398 aaPredicted RBP16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 MNDAP41218 407 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 SSX1Q16384 188 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 AGAP7PQ5VUJ5 663 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 ZNF836Q6ZNA1 936 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 ETFBKMTQ8IXQ9 262 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 SIX5Q8N196 739 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 MFSD4AQ8N468 514 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 OR13C5Q8NGS8 318 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 TRMT10AQ8TBZ6 339 aaKnown RBP16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 TRIM63Q969Q1 353 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 FYTTD1Q96QD9 318 aaKnown RBP16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 NUDT15Q9NV35 164 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 CCDC59Q9P031 241 aaKnown RBP16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 A0A1W2PRQ8 180 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 ZNF670-ZNF695F2Z2N8 137 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 SOX1O00570 391 aaPredicted RBP16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 DSCR3O14972 297 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 LYRM1O43325 122 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 MAOAP21397 527 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 GUCA1AP43080 201 aaPredicted RBP16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 PPP1CAP62136 330 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 FGL2Q14314 439 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 SGTBQ96EQ0 304 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 JSRP1Q96MG2 331 aaPredicted RBP16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 SIRT3Q9NTG7 399 aaPredicted RBP16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 SLC22A31A6NKX4 558 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 CD79BP40259 229 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 PDE7AQ13946 482 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 RUNX2Q13950 521 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 FXNQ16595 210 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 NANOGP1Q8N7R0 232 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 TMEM99Q8N816 258 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 HCAR2Q8TDS4 363 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 NSMAFQ92636 917 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 ZNF486Q96H40 463 aaPredicted RBP16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 FUZQ9BT04 418 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 CHRNB1P11230 501 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 S100A1P23297 94 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 MVDP53602 400 aa16.45■□□□□ 0.22
TRAF3IP1-201ENST00000373327 PRKCDQ05655 676 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms