RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 PRAMEF17Q5VTA0 474 aa16.5■□□□□ 0.23
CTSA-204ENST00000372484 TMPRSS11FQ6ZWK6 438 aa16.5■□□□□ 0.23
CTSA-204ENST00000372484 SHFQ7M4L6 423 aa16.5■□□□□ 0.23
CTSA-204ENST00000372484 GPR135Q8IZ08 494 aa16.5■□□□□ 0.23
CTSA-204ENST00000372484 OR1L3Q8NH93 324 aa16.5■□□□□ 0.23
CTSA-204ENST00000372484 CLIP3Q96DZ5 547 aa16.5■□□□□ 0.23
CTSA-204ENST00000372484 MVB12AQ96EY5 273 aa16.5■□□□□ 0.23
CTSA-204ENST00000372484 SENP5Q96HI0 755 aaPredicted RBP16.5■□□□□ 0.23
CTSA-204ENST00000372484 EXOSC4Q9NPD3 245 aaKnown RBP16.5■□□□□ 0.23
CTSA-204ENST00000372484 MEPEQ9NQ76 525 aaPredicted RBP16.5■□□□□ 0.23
CTSA-204ENST00000372484 B3GNT3Q9Y2A9 372 aa16.5■□□□□ 0.23
CTSA-204ENST00000372484 METTL15A6NJ78 407 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 TTC36A6NLP5 189 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 DSCR3O14972 297 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 GPX5O75715 221 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 FOLR1P15328 257 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 PSMA1P25786 263 aaKnown RBP16.49■□□□□ 0.23
CTSA-204ENST00000372484 ARRB1P49407 418 aaPredicted RBP16.49■□□□□ 0.23
CTSA-204ENST00000372484 ZSWIM7Q19AV6 140 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 TSSK4Q6SA08 328 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 ZNF550Q7Z398 422 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 D2HGDHQ8N465 521 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 LSMEM1Q8N8F7 131 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 OR9Q1Q8NGQ5 310 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 OR4C3Q8NH37 302 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 PTPMT1Q8WUK0 201 aaPredicted RBP16.49■□□□□ 0.23
CTSA-204ENST00000372484 OTULINQ96BN8 352 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 OR1F2PQ96R84 312 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 C6orf62Q9GZU0 229 aaPredicted RBP16.49■□□□□ 0.23
CTSA-204ENST00000372484 NDUFB11Q9NX14 153 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 H2AFY2Q9P0M6 372 aaPredicted RBP16.49■□□□□ 0.23
CTSA-204ENST00000372484 MMACHCQ9Y4U1 282 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 RCBTB2O95199 551 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 CLPSP04118 112 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 ZNF12P17014 697 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 ENDOUP21128 410 aaKnown RBP16.49■□□□□ 0.23
CTSA-204ENST00000372484 TBXA2RP21731 343 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 CTBP2P56545 445 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 WNT4P56705 351 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 LIPKQ5VXJ0 399 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 NXNL2Q5VZ03 156 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 RPL13AP3Q6NVV1 102 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 SMARCD3Q6STE5 483 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 UBALD2Q8IYN6 164 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 CADM2Q8N3J6 435 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 MFSD4AQ8N468 514 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 BBS1Q8NFJ9 593 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 OR7G1Q8NGA0 311 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 OR13C2Q8NGS9 318 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 ELF4Q99607 663 aaPredicted RBP16.49■□□□□ 0.23
CTSA-204ENST00000372484 NDC1Q9BTX1 674 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 ENKD1Q9H0I2 346 aa16.49■□□□□ 0.23
CTSA-204ENST00000372484 CCDC59Q9P031 241 aaKnown RBP16.49■□□□□ 0.23
CTSA-204ENST00000372484 EXOSC1Q9Y3B2 195 aaKnown RBP16.49■□□□□ 0.23
CTSA-204ENST00000372484 MN1Q10571 1320 aaPredicted RBP16.48■□□□□ 0.23
CTSA-204ENST00000372484 HEATR5AQ86XA9 2040 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 TMEM129A0AVI4 362 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 FAM183AA6NL82 134 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 A8MUA0 341 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 BHLHE40O14503 412 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 PRKNO60260 465 aaPredicted RBP16.48■□□□□ 0.23
CTSA-204ENST00000372484 RFPL3O75679 317 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 CSTAP01040 98 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 OR2G6Q5TZ20 316 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 CPOQ8IVL8 374 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 PHC2Q8IXK0 858 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 CMIPQ8IY22 773 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 SLC35B4Q969S0 331 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 DACH2Q96NX9 599 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 CDADC1Q9BWV3 514 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 HINT3Q9NQE9 182 aaKnown RBP16.48■□□□□ 0.23
CTSA-204ENST00000372484 RPS6KB2Q9UBS0 482 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 SEC14L4Q9UDX3 406 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 SIGLEC7Q9Y286 467 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 PI4KAP42356 2102 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 WWP2O00308 870 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 DYRK3O43781 588 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 HTR1FP30939 366 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.48■□□□□ 0.23
CTSA-204ENST00000372484 NDUFAF6Q330K2 333 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 SLC35F1Q5T1Q4 408 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 CXXC5Q7LFL8 322 aaKnown RBP16.48■□□□□ 0.23
CTSA-204ENST00000372484 TMEM151BQ8IW70 566 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 TSLPQ969D9 159 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 EFHD2Q96C19 240 aaPredicted RBP16.48■□□□□ 0.23
CTSA-204ENST00000372484 SLC41A2Q96JW4 573 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 ZNF426Q9BUY5 554 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 PRDM6Q9NQX0 595 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 ENAMQ9NRM1 1142 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 STUB1Q9UNE7 303 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 CFL2Q9Y281 166 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 CLCA3PQ9Y6N3 262 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 A3GALT2U3KPV4 340 aa16.48■□□□□ 0.23
CTSA-204ENST00000372484 TRAV27A0A087WT01 109 aa16.47■□□□□ 0.23
CTSA-204ENST00000372484 SERINC4A6NH21 518 aa16.47■□□□□ 0.23
CTSA-204ENST00000372484 MAGEB3O15480 346 aa16.47■□□□□ 0.23
CTSA-204ENST00000372484 SOX6P35712 828 aa16.47■□□□□ 0.23
CTSA-204ENST00000372484 ATP6V1E1P36543 226 aa16.47■□□□□ 0.23
CTSA-204ENST00000372484 RBM34P42696 430 aaKnown RBP16.47■□□□□ 0.23
CTSA-204ENST00000372484 DHPSP49366 369 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms