RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 PRODHO43272 600 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 TPST2O60704 377 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 NKX2-2O95096 273 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 RAB36O95755 333 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 JMJD7P0C870 316 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 ENDOUP21128 410 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 LSM3P62310 102 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 MGAT2Q10469 447 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 FOXD4Q12950 439 aaPredicted RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 FAM53BQ14153 422 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 TGIF1Q15583 401 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 GDF7Q7Z4P5 450 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 MCATQ8IVS2 390 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 ZNF595Q8IYB9 648 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 VWA5B2Q8N398 1253 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 CLIP4Q8N3C7 705 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 SLC35B4Q969S0 331 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 ANKRD9Q96BM1 317 aaPredicted RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 ZG16BQ96DA0 208 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 LMF2Q9BU23 707 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 EPHA6Q9UF33 1036 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 PISDQ9UG56 409 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 LSM2Q9Y333 95 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 MYL12BO14950 172 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 KLF4O43474 513 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 PRKYO43930 277 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 LDB3O75112 727 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 DNAJB6O75190 326 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 SCG5P05408 212 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 IGFBP1P08833 259 aaPredicted RBP13.02□□□□□ -0.33
LDB3-204ENST00000372066 CCKBRP32239 447 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 TRHRP34981 398 aaPredicted RBP13.02□□□□□ -0.33
LDB3-204ENST00000372066 ZNF136P52737 540 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 IGLV3-21P80748 117 aaPredicted RBP13.02□□□□□ -0.33
LDB3-204ENST00000372066 BIKQ13323 160 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 MED22Q15528 200 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 ZNHIT3Q15649 155 aaPredicted RBP13.02□□□□□ -0.33
LDB3-204ENST00000372066 SNAPC1Q16533 368 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 ZNF404Q494X3 552 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 MINDY4Q4G0A6 757 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 SYT14P1Q58G82 188 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 RPL13AP3Q6NVV1 102 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 TUBA3EQ6PEY2 450 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 HMGN2P46Q86SG4 172 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 KIF18BQ86Y91 864 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 TMCO5AQ8N6Q1 288 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 MINDY2Q8NBR6 621 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 TMEM52Q8NDY8 209 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 OR5T3Q8NGG3 340 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 OR9Q1Q8NGQ5 310 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 B4GALNT2Q8NHY0 566 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 MCFD2Q8NI22 146 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 RPL3LQ92901 407 aaKnown RBP13.02□□□□□ -0.33
LDB3-204ENST00000372066 RFKQ969G6 155 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 HSPBAP1Q96EW2 488 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 ZNF285Q96NJ3 590 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 PELOQ9BRX2 385 aaKnown RBP13.02□□□□□ -0.33
LDB3-204ENST00000372066 TAPBPLQ9BX59 468 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 SIAEQ9HAT2 523 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 FGF20Q9NP95 211 aaPredicted RBP13.02□□□□□ -0.33
LDB3-204ENST00000372066 ISYNA1Q9NPH2 558 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 TMEM5Q9Y2B1 443 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 LOXL2Q9Y4K0 774 aa13.02□□□□□ -0.33
LDB3-204ENST00000372066 RP1P56715 2156 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 ATMQ13315 3056 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 METTL15A6NJ78 407 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 SGK494L7N484 410 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 CHST10O43529 356 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 TLX2O43763 284 aaPredicted RBP13.01□□□□□ -0.33
LDB3-204ENST00000372066 OR10H2O60403 315 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 RDH16O75452 317 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 NSA2O95478 260 aaKnown RBP13.01□□□□□ -0.33
LDB3-204ENST00000372066 HMGN1P05114 100 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 GLB1P16278 677 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 TYRP1P17643 537 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 EPHA4P54764 986 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 RAB40BQ12829 278 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 ZNF155Q12901 538 aaPredicted RBP13.01□□□□□ -0.33
LDB3-204ENST00000372066 MLLT11Q13015 90 aaPredicted RBP13.01□□□□□ -0.33
LDB3-204ENST00000372066 SPHARQ15513 63 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 GPR68Q15743 365 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 TCTE1Q5JU00 501 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 ACSM5Q6NUN0 579 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 OGFOD3Q6PK18 319 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 PRICKLE2Q7Z3G6 844 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 WDR53Q7Z5U6 358 aaPredicted RBP13.01□□□□□ -0.33
LDB3-204ENST00000372066 C17orf82Q86X59 251 aaPredicted RBP13.01□□□□□ -0.33
LDB3-204ENST00000372066 GRAMD2AQ8IUY3 354 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 GALNT12Q8IXK2 581 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 CARFQ8N187 725 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 IQCF1Q8N6M8 205 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 NANOGP1Q8N7R0 232 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 GPR151Q8TDV0 419 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 CHPT1Q8WUD6 406 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 LRR1Q96L50 414 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 ZNF582Q96NG8 517 aaPredicted RBP13.01□□□□□ -0.33
LDB3-204ENST00000372066 CD180Q99467 661 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 GPA33Q99795 319 aa13.01□□□□□ -0.33
LDB3-204ENST00000372066 NXF2Q9GZY0 626 aaKnown RBP13.01□□□□□ -0.33
LDB3-204ENST00000372066 RAB33BQ9H082 229 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms