RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ZNF136P52737 540 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 MVDP53602 400 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 TPD52P55327 224 aaPredicted RBP8.88□□□□□ -0.99
CD48-202ENST00000368046 SUMO3P55854 103 aaPredicted RBP8.88□□□□□ -0.99
CD48-202ENST00000368046 CLDN20P56880 219 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 CHRNEQ04844 493 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 MAPK14Q16539 360 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 SYPL1Q16563 259 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 SGCBQ16585 318 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 TUSC1Q2TAM9 212 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 METTL21CQ5VZV1 264 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 EIF3MQ7L2H7 374 aaKnown RBP8.88□□□□□ -0.99
CD48-202ENST00000368046 OLIG3Q7RTU3 272 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 MCEMP1Q8IX19 187 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 ZNF619Q8N2I2 560 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 C9orf106Q8NAJ2 232 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 TOR1AIP2Q8NFQ8 470 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 OR5W2Q8NH69 310 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 POC1BQ8TC44 478 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 ARSGQ96EG1 525 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 LAT2Q9GZY6 243 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 PAIP1Q9H074 479 aaKnown RBP8.88□□□□□ -0.99
CD48-202ENST00000368046 SLC52A3Q9NQ40 469 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.88□□□□□ -0.99
CD48-202ENST00000368046 SLC6A13Q9NSD5 602 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 THUMPD1Q9NXG2 353 aaKnown RBP8.88□□□□□ -0.99
CD48-202ENST00000368046 CLCF1Q9UBD9 225 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 DCTN4Q9UJW0 460 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 TRIM33Q9UPN9 1127 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 PCDHB14Q9Y5E9 798 aa8.88□□□□□ -0.99
CD48-202ENST00000368046 GPC6Q9Y625 555 aaPredicted RBP8.88□□□□□ -0.99
CD48-202ENST00000368046 SPTBN1Q01082 2364 aaKnown RBP8.87□□□□□ -0.99
CD48-202ENST00000368046 UNC79Q9P2D8 2635 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 NCOA6Q14686 2063 aaPredicted RBP8.87□□□□□ -0.99
CD48-202ENST00000368046 EXPH5Q8NEV8 1989 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 UQCRHLA0A096LP55 91 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 SHISA8B8ZZ34 492 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 CLIC1O00299 241 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 ADAMDEC1O15204 470 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 SEC14L5O43304 696 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 OIP5O43482 229 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 KIAA0513O60268 411 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 DNAJA2O60884 412 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 H6PDO95479 791 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 TGM6O95932 706 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 CSTAP01040 98 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 CRHP06850 196 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 SNRPB2P08579 225 aaKnown RBP8.87□□□□□ -0.99
CD48-202ENST00000368046 TFPTP0C1Z6 253 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 TMIGD3P0DMS9 266 aaPredicted RBP8.87□□□□□ -0.99
CD48-202ENST00000368046 NR2F1P10589 423 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 UBL4AP11441 157 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 IGFBP2P18065 325 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 CRATP43155 626 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 GSK3AP49840 483 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 RNF144AP50876 292 aaPredicted RBP8.87□□□□□ -0.99
CD48-202ENST00000368046 KCNJ10P78508 379 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 FUT5Q11128 374 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 FOXF2Q12947 444 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 CBFBQ13951 182 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 FGFBP1Q14512 234 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 SQLEQ14534 574 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 PLPPR5Q32ZL2 321 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 TIGD2Q4W5G0 525 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 AGKQ53H12 422 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 SLC25A53Q5H9E4 307 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 COX20Q5RI15 118 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 C6orf10Q5SRN2 563 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 PDSS1Q5T2R2 415 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 OR2A2Q6IF42 318 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 SLC2A7Q6PXP3 512 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 MEX3BQ6ZN04 569 aaKnown RBP8.87□□□□□ -0.99
CD48-202ENST00000368046 FRRS1Q6ZNA5 592 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 ESPNLQ6ZVH7 1005 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 P4HA3Q7Z4N8 544 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 GGNQ86UU5 652 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 RETREG3Q86VR2 466 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 GRAMD2AQ8IUY3 354 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 DMRTC2Q8IXT2 367 aaPredicted RBP8.87□□□□□ -0.99
CD48-202ENST00000368046 LILRA2Q8N149 483 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 METTL25Q8N6Q8 603 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 ANKFN1Q8N957 763 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 RFWD2Q8NHY2 731 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 FBXO27Q8NI29 283 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 PNPT1Q8TCS8 783 aaKnown RBP8.87□□□□□ -0.99
CD48-202ENST00000368046 SPDL1Q96EA4 605 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 LRRC46Q96FV0 321 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 THOC1Q96FV9 657 aaKnown RBP8.87□□□□□ -0.99
CD48-202ENST00000368046 MRGPRX4Q96LA9 322 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 RNF145Q96MT1 663 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 NPAS1Q99742 590 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 KLHDC3Q9BQ90 382 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 THUMPD3Q9BV44 507 aaKnown RBP8.87□□□□□ -0.99
CD48-202ENST00000368046 SLC38A1Q9H2H9 487 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 NPHS2Q9NP85 383 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 MED4Q9NPJ6 270 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 PAQR5Q9NXK6 330 aaPredicted RBP8.87□□□□□ -0.99
CD48-202ENST00000368046 FOXD3Q9UJU5 478 aaPredicted RBP8.87□□□□□ -0.99
CD48-202ENST00000368046 PRDM4Q9UKN5 801 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 SLC35A3Q9Y2D2 325 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms