RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 PPP2R2DQ66LE6 453 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 RFPL4BQ6ZWI9 263 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR1J4Q8NGS1 313 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 HMGB4Q8WW32 186 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 GAL3ST1Q99999 423 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 C11orf49Q9H6J7 331 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 KLRF1Q9NZS2 232 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 MBTPS1Q14703 1052 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 TMEM25Q86YD3 366 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 SLC35F3Q8IY50 421 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 HORMAD2Q8N7B1 307 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 BEST4Q8NFU0 473 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 SLC17A9Q9BYT1 436 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 MKL2Q9ULH7 1088 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 USP22Q9UPT9 525 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZNF443Q9Y2A4 671 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 CSNK1G3Q9Y6M4 447 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 WASH3PC4AMC7 463 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 STATHP02808 62 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 NUDT7P0C024 238 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 TCTE1Q5JU00 501 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 WASH2PQ6VEQ5 465 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZNF565Q8N9K5 539 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 MED18Q9BUE0 208 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 DPH1Q9BZG8 443 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 SOX1O00570 391 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 H2BFMP0C1H6 154 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 HTR3AP46098 478 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 FNTBP49356 437 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 SVBPQ8N300 66 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 GTPBP8Q8N3Z3 284 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR5AR1Q8NGP9 310 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 RBCK1Q9BYM8 510 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR8D2Q9GZM6 311 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 MFFQ9GZY8 342 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 PGAP2Q9UHJ9 254 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 V9GY05 133 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 FZD7O75084 574 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 SLC10A3P09131 477 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 SLC6A12P48065 614 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR13C3Q8NGS6 347 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 HOXB13Q92826 284 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 PDXPQ96GD0 296 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 CR2P20023 1033 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 GALEQ14376 348 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 RTL6Q6ICC9 239 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 APMAPQ9HDC9 416 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 GMPR2Q9P2T1 348 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 ERVK-19Q9WJR5 959 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 GAPDHSO14556 408 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 VSX2P58304 361 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZNF322Q6U7Q0 402 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR9A2Q8NGT5 310 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 TMEM212A6NML5 194 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 C9J4A7 227 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 AMY2BP19961 511 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 CAMK2DQ13557 499 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 C1orf189Q5VU69 101 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 RNF111Q6ZNA4 994 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 MAFIPQ8WZ33 124 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 OCEL1Q9H607 264 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 DDX31Q9H8H2 851 aaKnown RBP11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 DOCK6Q96HP0 2047 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 TP53I11O14683 189 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 CPMP14384 443 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 MAOAP21397 527 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 PGAP1Q75T13 922 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZNF14P17017 642 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 DRD5P21918 477 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 CRABP1P29762 137 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 NUDT1P36639 197 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 REEP5Q00765 189 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 ADAMTSL4Q6UY14 1074 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR5H6Q8NGV6 325 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 C11orf54Q9H0W9 315 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 NRIP3Q9NQ35 241 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 NOX1Q9Y5S8 564 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 SLC22A7Q9Y694 548 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 SRPX2O60687 465 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 CERS1P27544 350 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 CTSCP53634 463 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 ID2Q02363 134 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 ARHGAP40Q5TG30 622 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 SLC39A11Q8N1S5 342 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 RASGEF1AQ8N9B8 481 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR5D16Q8NGK9 328 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 INTS14Q96SY0 518 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZNF318Q5VUA4 2279 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 ARPC1BO15143 372 aaKnown RBP11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR2T1O43869 369 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZER1Q7Z7L7 766 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR4K17Q8NGC6 315 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR8K3Q8NH51 312 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 CASTOR1Q8WTX7 329 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 RTP3Q9BQQ7 232 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 RGCCQ9H4X1 137 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 NRXN2Q9P2S2 1712 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 POLR2CP19387 275 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZNF578Q96N58 590 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZFYVE21Q9BQ24 234 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms