RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 DEPDC4Q8N2C3 294 aa12.24□□□□□ -0.45
VPS29-201ENST00000360579 TMEM151AQ8N4L1 468 aa12.24□□□□□ -0.45
VPS29-201ENST00000360579 OR2W6PQ8NHA6 318 aa12.24□□□□□ -0.45
VPS29-201ENST00000360579 FAM110BQ8TC76 370 aa12.24□□□□□ -0.45
VPS29-201ENST00000360579 C10orf105Q8TEF2 133 aa12.24□□□□□ -0.45
VPS29-201ENST00000360579 PCNX3Q9H6A9 2034 aa12.24□□□□□ -0.45
VPS29-201ENST00000360579 GPC6Q9Y625 555 aaPredicted RBP12.24□□□□□ -0.45
VPS29-201ENST00000360579 OR5H1A6NKK0 313 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 E7EQL1 145 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 ZNF195O14628 629 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 KCNK2O95069 426 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 PGM3O95394 542 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 PGRP06401 933 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 COX5AP20674 150 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 IGFBP5P24593 272 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 SHC1P29353 583 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 SLC7A1P30825 629 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 PRIM2P49643 509 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 EFNA4P52798 201 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 SUMO3P55854 103 aaPredicted RBP12.23□□□□□ -0.45
VPS29-201ENST00000360579 RAC3P60763 192 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 C2orf54Q08AI8 447 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 HSPB3Q12988 150 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 TRADDQ15628 312 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 IMPG1Q17R60 797 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 TMEM176BQ3YBM2 270 aaPredicted RBP12.23□□□□□ -0.45
VPS29-201ENST00000360579 ZNF544Q6NX49 715 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 MTERF4Q7Z6M4 381 aaKnown RBP12.23□□□□□ -0.45
VPS29-201ENST00000360579 ZFP28Q8NHY6 868 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 ZFP90Q8TF47 636 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 MS4A4EQ96PG1 132 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 PSD2Q9BQI7 771 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 FUT8Q9BYC5 575 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 NPAP1Q9NZP6 1156 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 ACTL7BQ9Y614 415 aa12.23□□□□□ -0.45
VPS29-201ENST00000360579 ZNF724A8MTY0 619 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 PDPK1O15530 556 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 NUDT14O95848 222 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 IMPDH1P20839 514 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 ENPP1P22413 925 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 FABP6P51161 128 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 PRKAG1P54619 331 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 CHRNB3Q05901 458 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 RASGEF1BQ0VAM2 473 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 SELENBP1Q13228 472 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 CD226Q15762 336 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 FAM120AOSQ5T036 256 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 ZCCHC12Q6PEW1 402 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 ZNF551Q7Z340 670 aaPredicted RBP12.22□□□□□ -0.45
VPS29-201ENST00000360579 SLC22A9Q8IVM8 553 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 ARIH2OSQ8N7S6 290 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 COX18Q8N8Q8 333 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 ZNF527Q8NB42 609 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 NUP43Q8NFH3 380 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 FBXO27Q8NI29 283 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 ARL8AQ96BM9 186 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 TMEM237Q96Q45 408 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 PAFAH2Q99487 392 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 CXorf36Q9H7Y0 433 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 COQ10BQ9H8M1 238 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 NINJ2Q9NZG7 142 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 NTMQ9P121 344 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 PRSS50Q9UI38 385 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 ZNF180Q9UJW8 692 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 POLR3HQ9Y535 204 aaPredicted RBP12.22□□□□□ -0.45
VPS29-201ENST00000360579 TIMM22Q9Y584 194 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 PMF1-BGLAPU3KQ54 211 aa12.22□□□□□ -0.45
VPS29-201ENST00000360579 ALPK2Q86TB3 2170 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 LOC100289279A0A1B0GTE1 492 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 TRIM49D1C9J1S8 452 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 H3BNH8 94 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 NDUFS8O00217 210 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 EFNA2O43921 213 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 CYTIPO60759 359 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 ALOX5P09917 674 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 IGHV1-2P23083 117 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 ATP5F1P24539 256 aaPredicted RBP12.21□□□□□ -0.45
VPS29-201ENST00000360579 P2RX1P51575 399 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 ZNF117Q03924 483 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 RUNX1T1Q06455 604 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 SZRD1Q7Z422 152 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 GALNT5Q7Z7M9 940 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 LCA5Q86VQ0 697 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 RELL1Q8IUW5 271 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 ZNF100Q8IYN0 542 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 SLC16A11Q8NCK7 471 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 PHOSPHO1Q8TCT1 267 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 HTRA1Q92743 480 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 ZNF764Q96H86 408 aaPredicted RBP12.21□□□□□ -0.45
VPS29-201ENST00000360579 METTL2AQ96IZ6 378 aaKnown RBP12.21□□□□□ -0.45
VPS29-201ENST00000360579 MRGPRX4Q96LA9 322 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 KCNA7Q96RP8 456 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 INPP5KQ9BT40 448 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 HOXD1Q9GZZ0 328 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 CHODLQ9H9P2 273 aa12.21□□□□□ -0.45
VPS29-201ENST00000360579 ING1Q9UK53 422 aaPredicted RBP12.21□□□□□ -0.45
VPS29-201ENST00000360579 PLCE1Q9P212 2302 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 IGHV3-15A0A0B4J1V0 119 aa12.2□□□□□ -0.46
VPS29-201ENST00000360579 H3BQF6 201 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms