RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 NADSYN1Q6IA69 706 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 FAM160A2Q8N612 972 aaPredicted RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 TMEM165Q9HC07 324 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 IL2RGP31785 369 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 PDLIM3Q53GG5 364 aaPredicted RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 UBE2NLQ5JXB2 153 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 ESX1Q8N693 406 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 MSLNLQ96KJ4 702 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 CNTNAP3BQ96NU0 1288 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 DPH2Q9BQC3 489 aaPredicted RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 C1QTNF2Q9BXJ5 285 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 OR51J1Q9H342 316 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 HEBP1Q9NRV9 189 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 WNT11O96014 354 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 MTHFD2P13995 350 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 MYF6P23409 242 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 GKP32189 559 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 SENP5Q96HI0 755 aaPredicted RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 RDH14Q9HBH5 336 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 C17orf105B2RV13 164 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 GGT5P36269 586 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 RGNQ15493 299 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 MMP21Q8N119 569 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 OR5D14Q8NGL3 314 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 BOD1Q96IK1 185 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 EPHX3Q9H6B9 360 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 KCNK2O95069 426 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 PLAG1Q6DJT9 500 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 C12orf45Q8N5I9 185 aaPredicted RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 OR13J1Q8NGT2 312 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 ELMOD3Q96FG2 381 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 ZNF681Q96N22 645 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 CLN5O75503 358 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 LCN8Q6JVE9 175 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 LRRC28Q86X40 367 aaPredicted RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 KLHL42Q9P2K6 505 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 WIF1Q9Y5W5 379 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 NUP188Q5SRE5 1749 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 RGPD5Q99666 1765 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 SNAP29O95721 258 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 SH3BP2P78314 561 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 SF3A2Q15428 464 aaKnown RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 FBXO46Q6PJ61 603 aaPredicted RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 RTP4Q96DX8 246 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 SLC19A3Q9BZV2 496 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 ARNT2Q9HBZ2 717 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 B3GNT3Q9Y2A9 372 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 SULT1C2O00338 296 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 TIMD4Q96H15 378 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 GCM1Q9NP62 436 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 DECR2Q9NUI1 292 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 ZNF223Q9UK11 482 aaPredicted RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 SLC35E2BP0CK96 405 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 EIF1P41567 113 aaKnown RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 SLC39A5Q6ZMH5 540 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 NSUN5Q96P11 429 aaKnown RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 PEBP4Q96S96 227 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 ZNF334Q9HCZ1 680 aaPredicted RBP9.12□□□□□ -0.95
CUX1-203ENST00000360264 KCTD3Q9Y597 815 aa9.12□□□□□ -0.95
CUX1-203ENST00000360264 H7C1Q1 480 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 SURF4O15260 269 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 SELEP16581 610 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 DCAF12Q5T6F0 453 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 OR1J4Q8NGS1 313 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 PLEKHO2Q8TD55 490 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 ANKRD9Q96BM1 317 aaPredicted RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 CD8B2A6NJW9 211 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 DDAH2O95865 285 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 LCKP06239 509 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 CD8BP10966 210 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 SSR4P51571 173 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 CNEP1R1Q8N9A8 125 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 NDNFQ8TB73 568 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 MIB2Q96AX9 1013 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 SORCS2Q96PQ0 1159 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 LUZP4Q9P127 313 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 TESQ9UGI8 421 aaKnown RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 UBBP0CG47 229 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 UBCP0CG48 685 aaKnown RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 RPS27AP62979 156 aaKnown RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 UBA52P62987 128 aaKnown RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 PPP1R8Q12972 351 aaKnown RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 SLC36A2Q495M3 483 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 STEAP3Q658P3 488 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 PRRC1Q96M27 445 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 HSFX1Q9UBD0 423 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 H3BNC9 293 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 RFPL2O75678 378 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 PRR11Q96HE9 360 aaPredicted RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 OBP2BQ9NPH6 170 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 A0A1W2PPK0 400 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 FOXO6A8MYZ6 492 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 ZNF674Q2M3X9 581 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 PLCXD3Q63HM9 321 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 GPR150Q8NGU9 434 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 ZNF419Q96HQ0 510 aaPredicted RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 MUS81Q96NY9 551 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 GPR62Q9BZJ7 368 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 CPNE7Q9UBL6 633 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 ABOP16442 354 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms