RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CHMP24386 653 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 FPR3P25089 353 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 TTKP33981 857 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 ACAA2P42765 397 aaKnown RBP12.41□□□□□ -0.42
CCDC197-201ENST00000359253 GSSP48637 474 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 NR0B1P51843 470 aaKnown RBP12.41□□□□□ -0.42
CCDC197-201ENST00000359253 SLC26A5P58743 744 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 PLCXD2Q0VAA5 305 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 MAD2L1BPQ15013 274 aaPredicted RBP12.41□□□□□ -0.42
CCDC197-201ENST00000359253 NCF4Q15080 339 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 EXT1Q16394 746 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 FNDC7Q5VTL7 733 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 BROXQ5VW32 411 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 SLX4IPQ5VYV7 408 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 RPL13AP3Q6NVV1 102 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 FAM198BQ6UWH4 519 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 RASSF6Q6ZTQ3 369 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 P3H2Q8IVL5 708 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 SLC15A4Q8N697 577 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 ZNF614Q8N883 585 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 APCDD1LQ8NCL9 501 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 OR2Y1Q8NGV0 311 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 OR4C3Q8NH37 302 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 RHOXF1Q8NHV9 184 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 Q96MT0 163 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 LAT2Q9GZY6 243 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 ADNPQ9H2P0 1102 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 C12orf10Q9HB07 376 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 PLCXD1Q9NUJ7 323 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 IMPAD1Q9NX62 359 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 RPS6KB2Q9UBS0 482 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 SLC7A7Q9UM01 511 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 ALG1L2C9J202 215 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 GTPBP1O00178 669 aaKnown RBP12.4□□□□□ -0.42
CCDC197-201ENST00000359253 PLD2O14939 933 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 ZNF264O43296 627 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 CNOT3O75175 753 aaKnown RBP12.4□□□□□ -0.42
CCDC197-201ENST00000359253 TFAP2AP05549 437 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 GKN3PP0CG01 181 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 UBL4AP11441 157 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 POU2F1P14859 743 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 ZNF28P17035 718 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 HTR2AP28223 471 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 OMPP47874 163 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 TMED10P49755 219 aaKnown RBP12.4□□□□□ -0.42
CCDC197-201ENST00000359253 PRKCDQ05655 676 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 MEP1AQ16819 746 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 FAAH2Q6GMR7 532 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 ZNF773Q6PK81 442 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 C6orf15Q6UXA7 325 aaPredicted RBP12.4□□□□□ -0.42
CCDC197-201ENST00000359253 SHISA6Q6ZSJ9 500 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 TMEM239Q8WW34 195 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 TTC9Q92623 222 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 OSTF1Q92882 214 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 EFHD2Q96C19 240 aaPredicted RBP12.4□□□□□ -0.42
CCDC197-201ENST00000359253 NXPE2Q96DL1 559 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 OMA1Q96E52 524 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 WDR77Q9BQA1 342 aaPredicted RBP12.4□□□□□ -0.42
CCDC197-201ENST00000359253 PRSS27Q9BQR3 290 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 SLC19A3Q9BZV2 496 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 ZNF700Q9H0M5 742 aa12.4□□□□□ -0.42
CCDC197-201ENST00000359253 SPEGQ15772 3267 aa12.4□□□□□ -0.43
CCDC197-201ENST00000359253 H3BN98 237 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 SLC1A7O00341 560 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 PPM1BO75688 479 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 STK17BO94768 372 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 OR6B1O95007 311 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 DLGAP3O95886 979 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 THY1P04216 161 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 ATXN8OSP0DMR3 200 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 PNMTP11086 282 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 PRG2P13727 222 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 SPINK2P20155 84 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 EEF1B2P24534 225 aaKnown RBP12.39□□□□□ -0.43
CCDC197-201ENST00000359253 ABCD3P28288 659 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 ELK4P28324 431 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 RBMS1P29558 406 aaKnown RBP12.39□□□□□ -0.43
CCDC197-201ENST00000359253 FOLR3P41439 243 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 SMSP52788 366 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 CTBP2P56545 445 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 SNRPGP62308 76 aaKnown RBP12.39□□□□□ -0.43
CCDC197-201ENST00000359253 NNATQ16517 81 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 CTU2Q2VPK5 515 aaKnown RBP12.39□□□□□ -0.43
CCDC197-201ENST00000359253 SLC25A30Q5SVS4 291 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 WBP2NLQ6ICG8 309 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 LCN10Q6JVE6 187 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 CASP12Q6UXS9 341 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 TMPRSS11FQ6ZWK6 438 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 NUP54Q7Z3B4 507 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 PRICKLE2Q7Z3G6 844 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 NKAIN4Q8IVV8 208 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 ENTHD1Q8IYW4 607 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 FAM81AQ8TBF8 368 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 M1APQ8TC57 530 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 TMCO6Q96DC7 493 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 ADOQ96SZ5 270 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 TUBA1CQ9BQE3 449 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 ZNF426Q9BUY5 554 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 SLC25A19Q9HC21 320 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 CTPS2Q9NRF8 586 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms