RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ST6GAL1P15907 406 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 FCARP24071 287 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 MAP2K3P46734 347 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 YPEL5P62699 121 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 ADAM15Q13444 863 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 ZIC1Q15915 447 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 GXYLT1Q4G148 440 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 IL20RBQ6UXL0 311 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 SFTPA2Q8IWL1 248 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 IZUMO1Q8IYV9 350 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 OR5M3Q8NGP4 307 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 SMAP2Q8WU79 429 aaPredicted RBP10.4□□□□□ -0.74
SSU72-202ENST00000359060 SGTBQ96EQ0 304 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 BMFQ96LC9 184 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 ENAMQ9NRM1 1142 aa10.4□□□□□ -0.74
SSU72-202ENST00000359060 HYAL3O43820 417 aaPredicted RBP10.4□□□□□ -0.75
SSU72-202ENST00000359060 PEBP1P30086 187 aaKnown RBP10.4□□□□□ -0.75
SSU72-202ENST00000359060 DLX2Q07687 328 aaPredicted RBP10.4□□□□□ -0.75
SSU72-202ENST00000359060 CRMP1Q14194 572 aa10.4□□□□□ -0.75
SSU72-202ENST00000359060 ELOCQ15369 112 aa10.4□□□□□ -0.75
SSU72-202ENST00000359060 ZNF620Q6ZNG0 422 aa10.4□□□□□ -0.75
SSU72-202ENST00000359060 GDPD3Q7L5L3 318 aa10.4□□□□□ -0.75
SSU72-202ENST00000359060 RBM12BQ8IXT5 1001 aaKnown RBP10.4□□□□□ -0.75
SSU72-202ENST00000359060 ZFPM2Q8WW38 1151 aa10.4□□□□□ -0.75
SSU72-202ENST00000359060 TTYH2Q9BSA4 534 aa10.4□□□□□ -0.75
SSU72-202ENST00000359060 SRA1Q9HD15 236 aaKnown RBP10.4□□□□□ -0.75
SSU72-202ENST00000359060 RPRD1BQ9NQG5 326 aaKnown RBP10.4□□□□□ -0.75
SSU72-202ENST00000359060 FBXO34Q9NWN3 711 aa10.4□□□□□ -0.75
SSU72-202ENST00000359060 ING3Q9NXR8 418 aa10.4□□□□□ -0.75
SSU72-202ENST00000359060 XKRYO14609 159 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 ORC5O43913 435 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 DEFB133Q30KQ1 61 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 CEP78Q5JTW2 689 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 ZNF425Q6IV72 752 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 GPR155Q7Z3F1 870 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 PRR22Q8IZ63 422 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 TOR1AIP2Q8NFQ8 470 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 OR8D4Q8NGM9 314 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 OR2A14Q96R47 310 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 MAP3K3Q99759 626 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 PDE7BQ9NP56 450 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 C19orf53Q9UNZ5 99 aaPredicted RBP10.39□□□□□ -0.75
SSU72-202ENST00000359060 SLC22A7Q9Y694 548 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 SCN8AQ9UQD0 1980 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 A0A1B0GWA3 101 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 TMEM229AB2RXF0 380 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 RGS9O75916 674 aaPredicted RBP10.39□□□□□ -0.75
SSU72-202ENST00000359060 DHFRP00374 187 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 ERGP11308 486 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 NID1P14543 1247 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 TGM1P22735 817 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 GABRA5P31644 462 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 RPL13AP3Q6NVV1 102 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 MEPCEQ7L2J0 689 aaKnown RBP10.39□□□□□ -0.75
SSU72-202ENST00000359060 FGD2Q7Z6J4 655 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 SCAIQ8N9R8 606 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 OR5W2Q8NH69 310 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 C4orf36Q96KX1 117 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 GAL3ST1Q99999 423 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 TBL1XR1Q9BZK7 514 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 NDUFB11Q9NX14 153 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 BABAM2Q9NXR7 383 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 MRTO4Q9UKD2 239 aaKnown RBP10.39□□□□□ -0.75
SSU72-202ENST00000359060 SPNP16150 400 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 SOX2P48431 317 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 PPP1CAP62136 330 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 KCNJ8Q15842 424 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 CCDC157Q569K6 752 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 PRAMEF8Q5VWM4 474 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 PRAMEF7Q5VXH5 474 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 MRM1Q6IN84 353 aaKnown RBP10.39□□□□□ -0.75
SSU72-202ENST00000359060 XKRXQ6PP77 449 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 GKN2Q86XP6 184 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 NECTIN4Q96NY8 510 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 G6PC3Q9BUM1 346 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 NUFIP1Q9UHK0 495 aaKnown RBP10.39□□□□□ -0.75
SSU72-202ENST00000359060 MUTYHQ9UIF7 546 aa10.39□□□□□ -0.75
SSU72-202ENST00000359060 LAMA2P24043 3122 aaKnown RBP10.39□□□□□ -0.75
SSU72-202ENST00000359060 SPAG17Q6Q759 2223 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 A0A075B6Q4 140 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 EEF1E1O43324 174 aaKnown RBP10.38□□□□□ -0.75
SSU72-202ENST00000359060 HCRTR2O43614 444 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 DNAJB6O75190 326 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 GABRB1P18505 474 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 NXNL2Q5VZ03 156 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 ZNF770Q6IQ21 691 aaPredicted RBP10.38□□□□□ -0.75
SSU72-202ENST00000359060 TMEM92Q6UXU6 159 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 KIF18BQ86Y91 864 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 LRRC17Q8N6Y2 441 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 KIAA1958Q8N8K9 716 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 ZNF527Q8NB42 609 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 SLC37A3Q8NCC5 494 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 DIO2Q92813 273 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 NEDD4LQ96PU5 975 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 OR2A5Q96R48 311 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 TRPV4Q9HBA0 871 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 BEX1Q9HBH7 125 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 TRAV6A0A075B6T7 132 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 TRBV2A0A0J9YWF9 115 aa10.38□□□□□ -0.75
SSU72-202ENST00000359060 MCIDASD6RGH6 385 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms