RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 RFX3P48380 749 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 CLDN20P56880 219 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 KIR2DS3Q14952 304 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 HBMQ6B0K9 141 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 FAM109BQ6ICB4 259 aaPredicted RBP7.97□□□□□ -1.13
RFX3-202ENST00000358730 RNF113BQ8IZP6 322 aaKnown RBP7.97□□□□□ -1.13
RFX3-202ENST00000358730 SHISA5Q8N114 240 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 LNX2Q8N448 690 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 YIPF7Q8N8F6 280 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 SLC37A3Q8NCC5 494 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 DUSP18Q8NEJ0 188 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 OR5W2Q8NH69 310 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 FLVCR1-AS1Q8TAF5 88 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 BPIFA2Q96DR5 249 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 TM4SF19Q96DZ7 209 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 KCNJ15Q99712 375 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 TIMP4Q99727 224 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 NDC1Q9BTX1 674 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 NDEL1Q9GZM8 345 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 IGFLR1Q9H665 355 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 SYNDIG1Q9H7V2 258 aa7.97□□□□□ -1.13
RFX3-202ENST00000358730 MRPS2Q9Y399 296 aaKnown RBP7.97□□□□□ -1.13
RFX3-202ENST00000358730 MYO9BQ13459 2157 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 LOC105369274A0A096LPK9 316 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 ANKRD34BA5PLL1 514 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 SCO2O43819 266 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 ORC5O43913 435 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 FGF17O60258 216 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 RCBTB2O95199 551 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 MT-ND5P03915 603 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 FAM157BP0CG42 384 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 SMIM10L1P0DMW3 83 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 F8A1P23610 371 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 BMP8BP34820 402 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 SHC2P98077 582 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 FOXK2Q01167 660 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 SLC3A1Q07837 685 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 GALEQ14376 348 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 EXOSC7Q15024 291 aaKnown RBP7.96□□□□□ -1.13
RFX3-202ENST00000358730 TMEM196Q5HYL7 178 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 FHL5Q5TD97 284 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 RPL13AP3Q6NVV1 102 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 BMP8AQ7Z5Y6 402 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 LRRC28Q86X40 367 aaPredicted RBP7.96□□□□□ -1.13
RFX3-202ENST00000358730 CDK20Q8IZL9 346 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 TCTE3Q8IZS6 198 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 OR4N4Q8N0Y3 316 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 ZNF614Q8N883 585 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 DTX3Q8N9I9 347 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 CDRT4Q8N9R6 151 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 CAMKVQ8NCB2 501 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 SMIM10Q96HG1 83 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 TMEM168Q9H0V1 697 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 PPIL3Q9H2H8 161 aaKnown RBP7.96□□□□□ -1.13
RFX3-202ENST00000358730 SLA2Q9H6Q3 261 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 CAPN10Q9HC96 672 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 TRPV5Q9NQA5 729 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 KLHL1Q9NR64 748 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 CMC2Q9NRP2 79 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 KLHL21Q9UJP4 597 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 SATB2Q9UPW6 733 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 MED31Q9Y3C7 131 aa7.96□□□□□ -1.13
RFX3-202ENST00000358730 RIIAD1A6NNX1 92 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 E9PI62 339 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 TRIM3O75382 744 aaPredicted RBP7.96□□□□□ -1.14
RFX3-202ENST00000358730 LYPD3O95274 346 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 CLUP10909 449 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 SHC1P29353 583 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 NOS3P29474 1203 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 NTSR1P30989 418 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 RAB25P57735 213 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 OR10A3P58181 314 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 KIAA1024LP59773 190 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 EFR3AQ14156 821 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 NFATC4Q14934 902 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 AMZ1Q400G9 498 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 Q5BKY6 102 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 SNAP47Q5SQN1 464 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 GARNL3Q5VVW2 1013 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 FCRL6Q6DN72 434 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 SYCE2Q6PIF2 218 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 FIGLAQ6QHK4 219 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 PARM1Q6UWI2 310 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 SAMD12Q8N8I0 201 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 CYB561A3Q8NBI2 242 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 TMEM52Q8NDY8 209 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 OR4M1Q8NGD0 313 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 OR5T3Q8NGG3 340 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 OR5M3Q8NGP4 307 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 OR51A7Q8NH64 312 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 FGF14Q92915 247 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 RERGQ96A58 199 aaPredicted RBP7.96□□□□□ -1.14
RFX3-202ENST00000358730 WDR92Q96MX6 357 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 MYADMQ96S97 322 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 SMAD5Q99717 465 aaKnown RBP7.96□□□□□ -1.14
RFX3-202ENST00000358730 DUSP22Q9NRW4 184 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 MCUBQ9NWR8 336 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 ACTR10Q9NZ32 417 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 MAT2BQ9NZL9 334 aa7.96□□□□□ -1.14
RFX3-202ENST00000358730 RASD1Q9Y272 281 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms