RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 RAP1AP62834 184 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 NFATC4Q14934 902 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 POMZP3Q6PJE2 187 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 CD163Q86VB7 1156 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ARFGAP1Q8N6T3 406 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 C2orf69Q8N8R5 385 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 OR6N2Q8NGY6 317 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 TGM7Q96PF1 710 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 OR52A5Q9H2C5 316 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 NRIP3Q9NQ35 241 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SLC22A11Q9NSA0 550 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 TREX1Q9NSU2 369 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SLIT2O94813 1529 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 A0A0B4J2A0 478 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CDHR4A6H8M9 788 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM235A6NFC5 223 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 NPIPA7E9PJI5 369 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 FKTNO75072 461 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 FBXO24O75426 580 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 NPIPA8P0DM63 369 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 NME1P15531 152 aaKnown RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 DGKZQ13574 1117 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 GPR157Q5UAW9 335 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 KIAA0907Q7Z7F0 614 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 PCED1BQ96HM7 432 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 LMF1Q96S06 567 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ZIC5Q96T25 663 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 KATNBL1Q9H079 304 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ABRACLQ9P1F3 81 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 SHPKQ9UHJ6 478 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 SLC9B1P1A6NJY1 282 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ANHXE9PGG2 379 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 GPR4P46093 362 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 HSD17B13Q7Z5P4 300 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF280BQ86YH2 543 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 KLHDC8BQ8IXV7 354 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 WDR20Q8TBZ3 569 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 OPALINQ96PE5 141 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 MRIQ9BWK5 157 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 OARD1Q9Y530 152 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CFAP20Q9Y6A4 193 aaKnown RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 SLURP2P0DP57 97 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ATP1B2P14415 290 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 IDSP22304 550 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 MAP2K6P52564 334 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 IRF5Q13568 498 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 KCNC3Q14003 757 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 RPL22L1Q6P5R6 122 aaKnown RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 PODNL1Q6PEZ8 512 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF574Q6ZN55 896 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 GPR155Q7Z3F1 870 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 SEMA6DQ8NFY4 1073 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 OR10R2Q8NGX6 335 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 OR10G6Q8NH81 332 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 LRFN5Q96NI6 719 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ASB6Q9NWX5 421 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 GRM6O15303 877 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 GBAP04062 536 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 MPIP34949 423 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 RNF4P78317 190 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 GLCCI1Q86VQ1 547 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 OR5AK2Q8NH90 309 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 PPTC7Q8NI37 304 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 FIZ1Q96SL8 496 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 OCSTAMPQ9BR26 566 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CLEC2DQ9UHP7 191 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 GJD2Q9UKL4 321 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 TIMM8BQ9Y5J9 83 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 BET1O15155 118 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 TLX3O43711 291 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 KCNJ13O60928 360 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 OR4Q2P0C623 313 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 RFC3P40938 356 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 FRMPD2BQ6IN97 320 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ETFRF1Q6IPR1 90 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 C1orf94Q6P1W5 598 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 P4HA3Q7Z4N8 544 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CELF5Q8N6W0 485 aaKnown RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 HPSE2Q8WWQ2 592 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 PRO1933Q9H354 126 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 DDX31Q9H8H2 851 aaKnown RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ABCA12Q86UK0 2595 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM129A0AVI4 362 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 SLC22A23A1A5C7 686 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 OR6C6A6NF89 314 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 NPIPA5E9PKD4 350 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 BCL2L11O43521 198 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 FZD7O75084 574 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CLDN7O95471 211 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 SELENOWP63302 87 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 SLC35A2P78381 396 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CCNJQ5T5M9 372 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 NAXEQ8NCW5 288 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 PITX2Q99697 317 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CLEC4EQ9ULY5 219 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 NPIPA1Q9UND3 350 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 HMX2A2RU54 273 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF195O14628 629 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 HCRTR2O43614 444 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 SCO2O43819 266 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms