RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 C19orf48Q6RUI8 117 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 NDNFQ8TB73 568 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 SPACA5Q96QH8 159 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 APMAPQ9HDC9 416 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 PRSS16Q9NQE7 514 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 POM121CA8CG34 1229 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 HNRNPA1P09651 372 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS13A-202ENST00000357409 CD46P15529 392 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 FOXL2P58012 376 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 C3AR1Q16581 482 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 DCUN1D4Q92564 292 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 FGF14Q92915 247 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 SCRN2Q96FV2 425 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 ZNF223Q9UK11 482 aaPredicted RBP6.89□□□□□ -1.31
VPS13A-202ENST00000357409 MCTS1Q9ULC4 181 aaKnown RBP6.89□□□□□ -1.31
VPS13A-202ENST00000357409 ANTXRLA6NF34 631 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 GABRR3A8MPY1 467 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 RETP07949 1114 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 CHRNB4P30926 498 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 RPL35P42766 123 aaKnown RBP6.89□□□□□ -1.31
VPS13A-202ENST00000357409 MLF2Q15773 248 aaPredicted RBP6.89□□□□□ -1.31
VPS13A-202ENST00000357409 C14orf28Q4W4Y0 310 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 SPATA46Q5T0L3 261 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 AKAP1Q92667 903 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS13A-202ENST00000357409 OSTF1Q92882 214 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 C1orf74Q96LT6 269 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 HYLS1Q96M11 299 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 C3orf30Q96M34 536 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 HCAR1Q9BXC0 346 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 MTMR10Q9NXD2 777 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 HRH3Q9Y5N1 445 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 E9PCH4 1651 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 DLC1Q96QB1 1528 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 KIAA0513O60268 411 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 LCMT2O60294 686 aaKnown RBP6.89□□□□□ -1.31
VPS13A-202ENST00000357409 FBXO24O75426 580 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 HTN1P15515 57 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 NADSYN1Q6IA69 706 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 ZNF517Q6ZMY9 492 aaPredicted RBP6.89□□□□□ -1.31
VPS13A-202ENST00000357409 SPAG16Q8N0X2 631 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 OR51E2Q9H255 320 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 CUTCQ9NTM9 273 aa6.89□□□□□ -1.31
VPS13A-202ENST00000357409 C2CD4DB7Z1M9 353 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 H0YGG7 62 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 LILRB5O75023 590 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 ARL6IP5O75915 188 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 NUDT7P0C024 238 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 UBL4AP11441 157 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 LGALS4P56470 323 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 GLYR1Q49A26 553 aaPredicted RBP6.88□□□□□ -1.31
VPS13A-202ENST00000357409 CCDC36Q8IYA8 594 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 ZNF454Q8N9F8 522 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 DNAJB8Q8NHS0 232 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 EDEM2Q9BV94 578 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 UBE2ZQ9H832 354 aaPredicted RBP6.88□□□□□ -1.31
VPS13A-202ENST00000357409 FGF21Q9NSA1 209 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 LATS1O95835 1130 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 IFNA2P01563 188 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 F2RP25116 425 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 PCGF2P35227 344 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 OR2G6Q5TZ20 316 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 CPOQ8IVL8 374 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 ELP5Q8TE02 316 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 SLC29A3Q9BZD2 475 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 PTBP2Q9UKA9 531 aaKnown RBP6.88□□□□□ -1.31
VPS13A-202ENST00000357409 BCAS1O75363 584 aaPredicted RBP6.88□□□□□ -1.31
VPS13A-202ENST00000357409 GM2AP17900 193 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 BTG2P78543 158 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 ZXDAP98168 799 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 MARCH8Q5T0T0 291 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 SHEQ5VZ18 495 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 KIAA1614Q5VZ46 1190 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 SPPL3Q8TCT6 385 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 MAFIPQ8WZ33 124 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 NOX3Q9HBY0 568 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 OR6C2Q9NZP2 312 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 OR5K4A6NMS3 321 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 SCAMP2O15127 329 aaKnown RBP6.88□□□□□ -1.31
VPS13A-202ENST00000357409 SOCS5O75159 536 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 AKR7A3O95154 331 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 IL9P15248 144 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 PCSK2P16519 638 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 NDUFB7P17568 137 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 POLR2IP36954 125 aaKnown RBP6.88□□□□□ -1.31
VPS13A-202ENST00000357409 NDUFA6P56556 154 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 TUBA1BP68363 451 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 TUBA4AP68366 448 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 MGAT3Q09327 533 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 ZNF252P-AS1Q0IIN9 211 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 GNMTQ14749 295 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 C1orf220Q5T0J3 134 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 SLC22A25Q6T423 547 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 TUBA1AQ71U36 451 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 ADIPOR2Q86V24 386 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 SCML4Q8N228 414 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 HRASLS5Q96KN8 279 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 URM1Q9BTM9 101 aaKnown RBP6.88□□□□□ -1.31
VPS13A-202ENST00000357409 GALNT9Q9HCQ5 603 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 KCND1Q9NSA2 647 aa6.88□□□□□ -1.31
VPS13A-202ENST00000357409 FAM120CQ9NX05 1096 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms