RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 NRMQ8IXM6 262 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 CPXM2Q8N436 756 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR2T35Q8NGX2 323 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 RFT1Q96AA3 541 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 RAD51AP1Q96B01 352 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 TCEAL4Q96EI5 215 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZNF558Q96NG5 402 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC38A3Q99624 504 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 TEX12Q9BXU0 123 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 NKX6-2Q9C056 277 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZCCHC2Q9C0B9 1178 aaKnown RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 RNF32Q9H0A6 362 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR51V1Q9H2C8 321 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR51J1Q9H342 316 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 XKR8Q9H6D3 395 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 SPHK1Q9NYA1 384 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 MRPL15Q9P015 296 aaKnown RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 NDOR1Q9UHB4 597 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 RASD1Q9Y272 281 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 GPR55Q9Y2T6 319 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC6A5Q9Y345 797 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 PLXND1Q9Y4D7 1925 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 TRDV1A0A1B0GX56 115 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 TGM5O43548 720 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 SSNA1O43805 119 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 C8AP07357 584 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 FUT1P19526 365 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 PTAFRP25105 342 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 MAZP56270 477 aaKnown RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 CLDN2P57739 230 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 RGS8P57771 180 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 KIAA1024LP59773 190 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 RAB33AQ14088 237 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 NDUFA9Q16795 377 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 HFEQ30201 348 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZNF805Q5CZA5 627 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 C1orf94Q6P1W5 598 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 ESPNLQ6ZVH7 1005 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 HSD17B13Q7Z5P4 300 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 MOSPD2Q8NHP6 518 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 RFKQ969G6 155 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 PRRC1Q96M27 445 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 PTDSS2Q9BVG9 487 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 PAPOLGQ9BWT3 736 aaKnown RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 MIOXQ9UGB7 285 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 SCP2D1Q9UJQ7 156 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 ASB4Q9Y574 426 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 PCYT1BQ9Y5K3 369 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 IRAK3Q9Y616 596 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 RNF215Q9Y6U7 377 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 ALPK3Q96L96 1907 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 C7orf66A4D0T2 115 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 CHST10O43529 356 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 PIP5K1CO60331 668 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 EIF4EP06730 217 aaKnown RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 SYN1P17600 705 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 GSTM3P21266 225 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 GIFP27352 417 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 NTSP30990 170 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 BSGP35613 385 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 IFNGR2P38484 337 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 GCGRP47871 477 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 CCR6P51684 374 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 EEF1A1P68104 462 aaKnown RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 RELQ04864 619 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 LGALS3BPQ08380 585 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 EEF1A1P5Q5VTE0 462 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC25A25Q6KCM7 469 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 FAM198BQ6UWH4 519 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 LRRTM4Q86VH4 590 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 NR2C2APQ86WQ0 139 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 C12orf40Q86WS4 652 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZNF547Q8IVP9 402 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 MCATQ8IVS2 390 aaKnown RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 TCEAL8Q8IYN2 117 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 GPR135Q8IZ08 494 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZNF454Q8N9F8 522 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 MORN4Q8NDC4 146 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 IRF7Q92985 503 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 C12orf66Q96MD2 445 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 KCNJ15Q99712 375 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 CHIAQ9BZP6 476 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 SPRTNQ9H040 489 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR51M1Q9H341 326 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 SEMA4GQ9NTN9 838 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 POMT2Q9UKY4 750 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 ICKQ9UPZ9 632 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 SCN8AQ9UQD0 1980 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 PGRMC2O15173 223 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 NDUFS4O43181 175 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 EPPINO95925 133 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 TBX6O95947 436 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 H2AFB1P0C5Y9 115 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 H2AFB2P0C5Z0 115 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 ITGB8P26012 769 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC6A1P30531 599 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 FGF9P31371 208 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 RORAP35398 523 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 CCR2P41597 374 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 RFX3P48380 749 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms