RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ATP13A2Q9NQ11 1180 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 LAMP3Q9UQV4 416 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 HRH3Q9Y5N1 445 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 CORINQ9Y5Q5 1042 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 TMEM82A0PJX8 343 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 UPP2O95045 317 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 CX3CR1P49238 355 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 UBE2J1Q9Y385 318 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-202ENST00000357162 GPSM3Q9Y4H4 160 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 LOC100509620A0A075B734 347 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 TSPAN11A1L157 253 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 MBP02144 154 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 HBQ1P09105 142 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF805Q5CZA5 627 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 NRARPQ7Z6K4 114 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 VRK3Q8IV63 474 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 TMEM102Q8N9M5 508 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-202ENST00000357162 OR51G2Q8NGK0 314 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 PITX2Q99697 317 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 DNAJC5Q9H3Z4 198 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 ASF1BQ9NVP2 202 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 SPHK1Q9NYA1 384 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 TIMM13Q9Y5L4 95 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-202ENST00000357162 PLSCR1O15162 318 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF133P52736 654 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-202ENST00000357162 PLP2Q04941 152 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 EDAQ92838 391 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 DUS2Q9NX74 493 aaKnown RBP6.2□□□□□ -1.42
VPS13B-202ENST00000357162 SOX18P35713 384 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 PDE7AQ13946 482 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 AMZ1Q400G9 498 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 FRMPD2BQ6IN97 320 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 NXPE4Q6UWF7 544 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 COMMD6Q7Z4G1 85 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 OR2L13Q8N349 312 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 KLRG1Q96E93 195 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 FAM46AQ96IP4 442 aaKnown RBP6.2□□□□□ -1.42
VPS13B-202ENST00000357162 P2RY13Q9BPV8 354 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 RIMS4Q9H426 269 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-202ENST00000357162 CARS2Q9HA77 564 aaKnown RBP6.2□□□□□ -1.42
VPS13B-202ENST00000357162 KCNIP1Q9NZI2 227 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 MAP10Q9P2G4 905 aa6.2□□□□□ -1.42
VPS13B-202ENST00000357162 MGMTP16455 207 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 PCBD1P61457 104 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF674Q2M3X9 581 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 C22orf39Q6P5X5 142 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 LAS2Q8IYD9 372 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 SLC5A8Q8N695 610 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 SPACA1Q9HBV2 294 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 KCNG2Q9UJ96 466 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 RGPD2P0DJD1 1756 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 VSTM2BA6NLU5 285 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 CHRNA6Q15825 494 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 UGT8Q16880 541 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 TCTE1Q5JU00 501 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 FIGNL1Q6PIW4 674 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 TMEM150AQ86TG1 271 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 CADM3Q8N126 398 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 SLC29A1Q99808 456 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 WDR6Q9NNW5 1121 aaKnown RBP6.19□□□□□ -1.42
VPS13B-202ENST00000357162 CBLCQ9ULV8 474 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 FPR3P25089 353 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 FNTBP49356 437 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 UPP1Q16831 310 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 FLYWCH1Q4VC44 716 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 SLC35D3Q5M8T2 416 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 TMEM236Q5W0B7 351 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 SLC39A4Q6P5W5 647 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 CLIP4Q8N3C7 705 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 OR6M1Q8NGM8 313 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 HERPUD2Q9BSE4 406 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 PDGFDQ9GZP0 370 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-202ENST00000357162 A0A0U1RQF3 1178 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 SLC35F4A4IF30 521 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 BHLHE40O14503 412 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 GCAP28676 217 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 OR1D2P34982 312 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 ADAM19Q9H013 955 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 METTL17Q9H7H0 456 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-202ENST00000357162 RNF11Q9Y3C5 154 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 OR6C6A6NF89 314 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 K7EPK0 472 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 DIRAS1O95057 198 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 ACOT6Q3I5F7 207 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-202ENST00000357162 SULF2Q8IWU5 870 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 FAM71E2Q8N5Q1 922 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 TEPSINQ96N21 525 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF649Q9BS31 505 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 SAMD10Q9BYL1 202 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 NDRG4Q9ULP0 352 aaKnown RBP6.19□□□□□ -1.42
VPS13B-202ENST00000357162 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-202ENST00000357162 ANKRD11Q6UB99 2663 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-202ENST00000357162 AIPO00170 330 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 CHRNA4P43681 627 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 OPCMLQ14982 345 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 ISLR2Q6UXK2 745 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 PIM3Q86V86 326 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 SYS1Q8N2H4 156 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF587BE7ETH6 402 aa6.19□□□□□ -1.42
VPS13B-202ENST00000357162 GZMKP49863 264 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms