RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SLC7A13Q8TCU3 470 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 GRHL3Q8TE85 626 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 RNF138Q8WVD3 245 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 CDCP1Q9H5V8 836 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 TESQ9UGI8 421 aaKnown RBP16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 SPTBN2O15020 2390 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 MED13Q9UHV7 2174 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 MAGEA13PA6NCF6 341 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 MITFO75030 526 aaPredicted RBP16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 CYP7B1O75881 506 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 OR5F1O95221 314 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 NTN1O95631 604 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 LYNP07948 512 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 UBL4AP11441 157 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 SOX3P41225 446 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 MLF1P58340 268 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 FOXC1Q12948 553 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 SKP2Q13309 424 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 OR1Q1Q15612 314 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 ZNF791Q3KP31 576 aaPredicted RBP16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 H3F3CQ6NXT2 135 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 CBLN3Q6UW01 205 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 GDF7Q7Z4P5 450 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 RPS19BP1Q86WX3 136 aaKnown RBP16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 LINC00471Q8N535 108 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 OR9Q2Q8NGE9 314 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 KLHDC3Q9BQ90 382 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 PCDHGB5Q9Y5G0 923 aa16.62■□□□□ 0.25
SMARCD3-202ENST00000356800 SH3PXD2BA1X283 911 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 OR6B1O95007 311 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 LYPD3O95274 346 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 SPINK2P20155 84 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 CBLP22681 906 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 ST3GAL3Q11203 375 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 NTRK2Q16620 822 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 ATP1A1-AS1Q5TC04 95 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 KRT80Q6KB66 452 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 PODNL1Q6PEZ8 512 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 NUP54Q7Z3B4 507 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 GALNT5Q7Z7M9 940 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 TOR1AIP2Q8NFQ8 470 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 OR10G3Q8NGC4 313 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 PSMF1Q92530 271 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 NXPE2Q96DL1 559 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 SPACA9Q96E40 222 aaPredicted RBP16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 SLC41A3Q96GZ6 507 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 ZNF559Q9BR84 538 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 GABARAPL3Q9BY60 117 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 TBL1XR1Q9BZK7 514 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 GRIP2Q9C0E4 1043 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 PAPOLBQ9NRJ5 636 aaKnown RBP16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 CARD8Q9Y2G2 431 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 POFUT2Q9Y2G5 429 aa16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 YARS2Q9Y2Z4 477 aaKnown RBP16.61■□□□□ 0.25
SMARCD3-202ENST00000356800 LOC100130705A0A1B0GUX0 176 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 E9PQ18 207 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 ZNF264O43296 627 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 SCO2O43819 266 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 WT1P19544 449 aaPredicted RBP16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 TMED10P49755 219 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 LSM11P83369 360 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 TRAM2Q15035 370 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 TBC1D25Q3MII6 688 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 DCAF10Q5QP82 559 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 ZNF550Q7Z398 422 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 PARP8Q8N3A8 854 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 BRIX1Q8TDN6 353 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 TTC9Q92623 222 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 IP6K3Q96PC2 410 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 ZNF556Q9HAH1 456 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 EXOSC3Q9NQT5 275 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 PNPLA3Q9NST1 481 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 WASF3Q9UPY6 502 aa16.6■□□□□ 0.25
SMARCD3-202ENST00000356800 TRAPPC13A5PLN9 417 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 H3BNH8 94 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 GTPBP1O00178 669 aaKnown RBP16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 NDUFB5O43674 189 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 CLIC3O95833 236 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 ANGPTL1O95841 491 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 ADAP00813 363 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 RYKP34925 604 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 RPS6KA3P51812 740 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 GAS1P54826 345 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 ZNF117Q03924 483 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 CLN3Q13286 438 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 IL18R1Q13478 541 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 B3GNTL1Q67FW5 361 aaPredicted RBP16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 BICRALQ6AI39 1079 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 NKAIN4Q8IVV8 208 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 SIRT6Q8N6T7 355 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 AQP11Q8NBQ7 271 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 ZNF524Q96C55 264 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 TMCO6Q96DC7 493 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 MUS81Q96NY9 551 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 NIPSNAP1Q9BPW8 284 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 LAT2Q9GZY6 243 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 WDR70Q9NW82 654 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 SLC7A7Q9UM01 511 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 MGAT4BQ9UQ53 548 aa16.59■□□□□ 0.25
SMARCD3-202ENST00000356800 CPAMD8Q8IZJ3 1885 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms