RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 NDC1Q9BTX1 674 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 KATNB1Q9BVA0 655 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 RSPO3Q9BXY4 272 aaPredicted RBP11.32□□□□□ -0.6
SIRPA-201ENST00000356025 ENKD1Q9H0I2 346 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 SLC25A18Q9H1K4 315 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 SYNPO2LQ9H987 977 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 EXOSC1Q9Y3B2 195 aaKnown RBP11.32□□□□□ -0.6
SIRPA-201ENST00000356025 HYKKA2RU49 373 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 SLC9B1P1A6NJY1 282 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 DOK2O60496 412 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 RECKO95980 971 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 GABRB1P18505 474 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 EDNRAP25101 427 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 MAGEB1P43366 347 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 MAP2K3P46734 347 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 IRF3Q14653 427 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 SMAD2Q15796 467 aaKnown RBP11.32□□□□□ -0.6
SIRPA-201ENST00000356025 SLC37A3Q8NCC5 494 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 OR13H1Q8NG92 308 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 SNAPC3Q92966 411 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 WDR34Q96EX3 536 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 TGM7Q96PF1 710 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 AICDAQ9GZX7 198 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 ABCG5Q9H222 651 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 ZSCAN32Q9NX65 697 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 SIDT1Q9NXL6 827 aaKnown RBP11.32□□□□□ -0.6
SIRPA-201ENST00000356025 RASD1Q9Y272 281 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 AP1M2Q9Y6Q5 423 aa11.32□□□□□ -0.6
SIRPA-201ENST00000356025 PLXND1Q9Y4D7 1925 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 A0A075B6Q4 140 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 FAM172BPA6NC97 362 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 TRIM64BA6NI03 449 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 H7C1C5 153 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 HMGA2P52926 109 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 MAZP56270 477 aaKnown RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 SNRPGP62308 76 aaKnown RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 LCN6P62502 163 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 ATCAYQ86WG3 371 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 HCAR2Q8TDS4 363 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 DCLRE1CQ96SD1 692 aaKnown RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 TEX101Q9BY14 249 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 CRISPLD2Q9H0B8 497 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 TAS2R7Q9NYW3 318 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 IER3IP1Q9Y5U9 82 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 AHCTF1Q8WYP5 2266 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 SERTM1A2A2V5 107 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 TRAPPC13A5PLN9 417 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 MRPS14O60783 128 aaKnown RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 PLGP00747 810 aaPredicted RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 YES1P07947 543 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 FBXO45P0C2W1 286 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 SRP9P49458 86 aaKnown RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 HHEXQ03014 270 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 DLX2Q07687 328 aaPredicted RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 LYPD8Q6UX82 237 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 LINGO2Q7L985 606 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 NKX3-1Q99801 234 aaPredicted RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 NFKBIL1Q9UBC1 381 aaPredicted RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 YBX2Q9Y2T7 364 aaKnown RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 ZNF3P17036 446 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 PEBP1P30086 187 aaKnown RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 PSPHP78330 225 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 FUT5Q11128 374 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 RAB40BQ12829 278 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 BIKQ13323 160 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 BCL2L15Q5TBC7 163 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 FBXO42Q6P3S6 717 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 VN1R4Q7Z5H5 301 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 IL17RCQ8NAC3 791 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 MFSD9Q8NBP5 474 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 GCDHQ92947 438 aaPredicted RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 GAL3ST3Q96A11 431 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 HS6ST2Q96MM7 605 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 SDF2Q99470 211 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 TRIM36Q9NQ86 728 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 LYARQ9NX58 379 aaKnown RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 OR6C2Q9NZP2 312 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 CPNE7Q9UBL6 633 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 DIMT1Q9UNQ2 313 aaKnown RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.31□□□□□ -0.6
SIRPA-201ENST00000356025 ADAM18Q9Y3Q7 739 aa11.31□□□□□ -0.6
SIRPA-201ENST00000356025 AKR7A2O43488 359 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 CSTAP01040 98 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 BLVRAP53004 296 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 ERVK-25P63136 954 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 ENPP2Q13822 863 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 EIPR1Q53HC9 387 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 ZNF770Q6IQ21 691 aaPredicted RBP11.3□□□□□ -0.6
SIRPA-201ENST00000356025 SIRT6Q8N6T7 355 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 LMX1AQ8TE12 382 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 TRIM63Q969Q1 353 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 HSPA12BQ96MM6 686 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 TIMM29Q9BSF4 260 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 HCAR1Q9BXC0 346 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 NRSN2Q9GZP1 204 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 ERVK-19Q9WJR5 959 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 INMT-MINDY4F8WBC2 141 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 TRIOO75962 3097 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 RCBTB2O95199 551 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 TNFP01375 233 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms