RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PHOSPHO2Q8TCD6 241 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 SLC7A13Q8TCU3 470 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 GCDHQ92947 438 aaPredicted RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 TM4SF18Q96CE8 201 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 PFDN5Q99471 154 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 TAPBPLQ9BX59 468 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 LGR4Q9BXB1 951 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 SLC19A3Q9BZV2 496 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 EQTNQ9NQ60 294 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 IMP3Q9NV31 184 aaKnown RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 POMT2Q9UKY4 750 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 GPR52Q9Y2T5 361 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 MRPS23Q9Y3D9 190 aaKnown RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 PCDHGB7Q9Y5F8 929 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 OTOL1A6NHN0 477 aaPredicted RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 NARSO43776 548 aaKnown RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 DPM1O60762 260 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 RP2O75695 350 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 TBX6O95947 436 aaPredicted RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 ACAA1P09110 424 aaPredicted RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 NR2F6P10588 404 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 ELAVL4P26378 380 aaKnown RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 CTNNB1P35222 781 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 CD79BP40259 229 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 BUD31P41223 144 aaPredicted RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 FABP5Q01469 135 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 MLLT1Q03111 559 aaPredicted RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 ZNF628Q5EBL2 1059 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 KHDRBS2Q5VWX1 349 aaKnown RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 RAB11FIP2Q7L804 512 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 COMTD1Q86VU5 262 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 AMZ2Q86W34 360 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 NR4A3Q92570 626 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 FUZQ9BT04 418 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 PDCD10Q9BUL8 212 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 JAM3Q9BX67 310 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 PPP1R3EQ9H7J1 279 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 ZCCHC3Q9NUD5 404 aaKnown RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 INSL6Q9Y581 213 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 ST8SIA5O15466 376 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 PCDH8O95206 1070 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 PRNPP04156 253 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 ADRB3P13945 408 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 CXCL2P19875 107 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 ETV5P41161 510 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 UBE2MP61081 183 aaKnown RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 OR5M10Q6IEU7 315 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 PSRC1Q6PGN9 363 aaPredicted RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 LRRC56Q8IYG6 542 aaPredicted RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 PDXPQ96GD0 296 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 SENP5Q96HI0 755 aaPredicted RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 MSLNLQ96KJ4 702 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 CDCA4Q9BXL8 241 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 AHSPQ9NZD4 102 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 SCP2D1Q9UJQ7 156 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 E9PQ18 207 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 RASGRP1O95267 797 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 IGF2P01344 180 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 FGBP02675 491 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 G0S2P27469 103 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 SSR2P43308 183 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 EVX1P49640 407 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 CLEC12AQ5QGZ9 265 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 RGS7BPQ6MZT1 257 aaPredicted RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 OVCH2Q7RTZ1 564 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 IQCHQ86VS3 1027 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 MEIOBQ8N635 442 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 OR52N1Q8NH53 320 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 SP7Q8TDD2 431 aaPredicted RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 OR8D1Q8WZ84 308 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 SMPDL3AQ92484 453 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 UBE2E3Q969T4 207 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 CPNE2Q96FN4 548 aaPredicted RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 MAP3K3Q99759 626 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 AIF1LQ9BQI0 150 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 C7orf50Q9BRJ6 194 aaKnown RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 TRMT61BQ9BVS5 477 aaKnown RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 TEX12Q9BXU0 123 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 OR51I1Q9H343 314 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 PTGFRNQ9P2B2 879 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 KIF25Q9UIL4 384 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 OR1A2Q9Y585 309 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 USP34Q70CQ2 3546 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 ALPK3Q96L96 1907 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 A0A1W2PPK0 400 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 A0A1W2PS29 197 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 HMGN4O00479 90 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 LCMT2O60294 686 aaKnown RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 CH25HO95992 272 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 FAM157BP0CG42 384 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 OSMP13725 252 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 DDX6P26196 483 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMG6-202ENST00000354901 SIM1P81133 766 aaPredicted RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 MAP4K2Q12851 820 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 LASP1Q14847 261 aaKnown RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 HEPACAMQ14CZ8 416 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 ZNF791Q3KP31 576 aaPredicted RBP8.74□□□□□ -1.01
SMG6-202ENST00000354901 MZT2AQ6P582 158 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 TMEM107Q6UX40 140 aa8.74□□□□□ -1.01
SMG6-202ENST00000354901 NHLRC1Q6VVB1 395 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms