RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 CLK3P49761 638 aaKnown RBP14.29□□□□□ -0.12
CTSA-202ENST00000354880 IL1RL1Q01638 556 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 MED21Q13503 144 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 NTRK2Q16620 822 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 FCRLBQ6BAA4 426 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 ZNF770Q6IQ21 691 aaPredicted RBP14.29□□□□□ -0.12
CTSA-202ENST00000354880 CBLN3Q6UW01 205 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 NKAIN4Q8IVV8 208 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 TMCO5AQ8N6Q1 288 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 TOR1AIP2Q8NFQ8 470 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 GRHL3Q8TE85 626 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 CYGBQ8WWM9 190 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 SPACA9Q96E40 222 aaPredicted RBP14.29□□□□□ -0.12
CTSA-202ENST00000354880 LAT2Q9GZY6 243 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 TOR3AQ9H497 397 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 RYDENQ9NUL5 291 aaKnown RBP14.29□□□□□ -0.12
CTSA-202ENST00000354880 WDR70Q9NW82 654 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 OIP5O43482 229 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 SCO2O43819 266 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 MITFO75030 526 aaPredicted RBP14.28□□□□□ -0.12
CTSA-202ENST00000354880 LINGO3P0C6S8 592 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 CBLP22681 906 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 SOX3P41225 446 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 MLF1P58340 268 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 COPZ1P61923 177 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 SLC36A3Q495N2 470 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 OPN5Q6U736 354 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 GALNT5Q7Z7M9 940 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 AQP11Q8NBQ7 271 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 OR4K5Q8NGD3 323 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 ZNF570Q96NI8 536 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 NIPSNAP1Q9BPW8 284 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 ZNF556Q9HAH1 456 aa14.28□□□□□ -0.12
CTSA-202ENST00000354880 SPTBN2O15020 2390 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 A0A087WUU8 490 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 A0A0B4J2E0 115 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 A0A1B0GWA3 101 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 A0A1B0GX12 115 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 TRABD2BA6NFA1 517 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 HCRTR2O43614 444 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 MAN1A2O60476 641 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 EIF4E2O60573 245 aaKnown RBP14.27□□□□□ -0.12
CTSA-202ENST00000354880 GASTP01350 101 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 CDH2P19022 906 aaPredicted RBP14.27□□□□□ -0.12
CTSA-202ENST00000354880 CAPGP40121 348 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 SSR4P51571 173 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 CCR4P51679 360 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 ZNF117Q03924 483 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 KCNAB2Q13303 367 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 ZNF791Q3KP31 576 aaPredicted RBP14.27□□□□□ -0.12
CTSA-202ENST00000354880 H3F3CQ6NXT2 135 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 ZNF730Q6ZMV8 503 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 RRM2BQ7LG56 351 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 MISPQ8IVT2 679 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 OR10G3Q8NGC4 313 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 RNF138Q8WVD3 245 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 ACOT11Q8WXI4 607 aaPredicted RBP14.27□□□□□ -0.12
CTSA-202ENST00000354880 ASB15Q8WXK1 588 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 NXPE2Q96DL1 559 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 SH3YL1Q96HL8 342 aaPredicted RBP14.27□□□□□ -0.12
CTSA-202ENST00000354880 RPS6KB2Q9UBS0 482 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 MGAT4BQ9UQ53 548 aa14.27□□□□□ -0.12
CTSA-202ENST00000354880 ZFHX4Q86UP3 3567 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 H0YAE9 185 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 OR6B1O95007 311 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 ADAP00813 363 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 POU2F1P14859 743 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 SLC6A8P48029 635 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 DCAF10Q5QP82 559 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 PGBD2Q6P3X8 592 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 IL20RBQ6UXL0 311 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 APLFQ8IW19 511 aaPredicted RBP14.27□□□□□ -0.13
CTSA-202ENST00000354880 CADM2Q8N3J6 435 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 SIRT6Q8N6T7 355 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 RNF217Q8TC41 542 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 BRIX1Q8TDN6 353 aaKnown RBP14.27□□□□□ -0.13
CTSA-202ENST00000354880 TMEM255BQ8WV15 326 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 MBOAT4Q96T53 435 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 PRSS27Q9BQR3 290 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 PAPOLBQ9NRJ5 636 aaKnown RBP14.27□□□□□ -0.13
CTSA-202ENST00000354880 POFUT2Q9Y2G5 429 aa14.27□□□□□ -0.13
CTSA-202ENST00000354880 AKAP13Q12802 2813 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 DOCK10Q96BY6 2186 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 ADAM10O14672 748 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 TP53I11O14683 189 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 CHP2O43745 196 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 LYPD3O95274 346 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 UGT2B15P54855 530 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 ADARB1P78563 741 aaKnown RBP14.26□□□□□ -0.13
CTSA-202ENST00000354880 LSM11P83369 360 aaKnown RBP eCLIP14.26□□□□□ -0.133e-9■□□□□ 10.6
CTSA-202ENST00000354880 ALG10BQ5I7T1 473 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 JMJD6Q6NYC1 403 aaPredicted RBP14.26□□□□□ -0.13
CTSA-202ENST00000354880 ULK3Q6PHR2 472 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 VASH2Q86V25 355 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 DND1Q8IYX4 353 aaKnown RBP14.26□□□□□ -0.13
CTSA-202ENST00000354880 TMEM156Q8N614 296 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 DUSP19Q8WTR2 217 aa14.26□□□□□ -0.13
CTSA-202ENST00000354880 GTPBP3Q969Y2 492 aaKnown RBP14.26□□□□□ -0.13
CTSA-202ENST00000354880 THOC3Q96J01 351 aaKnown RBP14.26□□□□□ -0.13
CTSA-202ENST00000354880 CNBD2Q96M20 576 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms